Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq32 239 6e-58 seq21 129 7e-25 seq247 123 3e-23 >seq32 Length=605290 Score = 239 bits (264), Expect = 6e-58 Identities = 457/670 (68%), Gaps = 5/670 (1%) Strand=Plus/Plus Query 7329 TCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCG 7388 |||| || | || |||||||| || |||||||| || || | |||||| |||||||| | Sbjct 354448 TCGAGGAGAGGGTACGCTTTGCACGTTCACACGCAGTCCGGAGACGACGGAGGGCACGAG 354507 Query 7389 GGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGA 7448 |||| | || || || ||||| || || || |||||||| | |||||| | | Sbjct 354508 GGTTGTCTGAGATGTCCTTCTTGTGCTTGCGCTTAAACTCCTGCACGAAGTGGTTCACCA 354567 Query 7449 GTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAA 7508 | || || || || || || | || || || || || || | ||||| |||| Sbjct 354568 TGCGGTTGTCAAAGTCCTCCCCTCCGAGATGGGTGTCACCGGCCGTGGACTTGACCTCAA 354627 Query 7509 AGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAA 7568 |||| || | || ||| | | | || ||||| || ||||| || |||| |||||| | Sbjct 354628 AGATGCCGTCCTCGATGGTGAGGATGGACACATCGAAGGTACCGCCGCCCAAGTCAAAGA 354687 Query 7569 TGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCG 7628 |||| |||||| || || | | |||| ||||| ||||| ||||| ||||| |||| Sbjct 354688 TGAGCACGTTCCGTTCCCCGCCAATCTTCTGGTCGAGTCCGTAGGCGATGGCCGCGGCCG 354747 Query 7629 TTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 | || || || || || || || ||| ||||| || || | | || || || || | Sbjct 354748 TCGGCTCGTTGATGATGCGGAGCACGTTGAGGCCGGCGATGACTCCGGCGTCCTTGGTGG 354807 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | |||||||| || || || ||||||||||| || || || || |||| || || ||| Sbjct 354808 CCTGTCGTTGAGAGTCATTGAAGTAGGCCGGCACGGTGACCACGGCGTTTGTAACAGTCT 354867 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTT 7808 | ||||| |||| ||| || | || ||||| ||| | || ||||| || || ||||| | Sbjct 354868 TGCCGAGGTACGCTTCGGCAGTCTCCTTCATCTTGATGAGCACCATGGAGGAGATCTCCT 354927 Query 7809 CAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG 7868 | | || | |||||| || || || | || |||| |||| | || || | | Sbjct 354928 CGGGGAAGAAGTTTTTCGTCTCTCCCTTGTACTCCACTTGAATCTTTGGCTT---GGTTG 354984 Query 7869 CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGAC-CTGTTGGTCCGAA 7927 | | ||| ||||| | | ||| | ||||| ||| || || ||| | ||| | Sbjct 354985 CCTCATTGATGACCTTGAAGGGCCAGTGCTTCATGTCGCTCTGCACGCTGCT-GTCGTCA 355043 Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 || | ||||| |||||||| || || || ||||| || |||||||||||| | Sbjct 355044 AAGCGCCGACCGATGAGACGCTTCGCGTCGAACACTGTATTCACGGGGTTCATGGCCACT 355103 Query 7988 TGGTTCTTCG 7997 ||||||| || Sbjct 355104 TGGTTCTGCG 355113 Score = 214 bits (236), Expect = 2e-50 Identities = 453/670 (68%), Gaps = 11/670 (2%) Strand=Plus/Plus Query 7329 TCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCG 7388 |||| || | || |||||||| || |||||||| || || | |||||| |||||||| | Sbjct 339289 TCGAGGAGAGGGTACGCTTTGCACGTTCACACGCAGTCCGGAGACGACGGAGGGCACGAG 339348 Query 7389 GGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT-CAGAGAAGTGTCGAAGG 7447 | ||| | || || || ||||| || || || || ||||| | || | || || | Sbjct 339349 GCTTATCTGAGATGTCCTTCTTGTGCTTGCGCTTGAACTCCTGCACAAAATAGTTCACCA 339408 Query 7448 AGTCTCGAAT--CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTT 7505 | ||| | |||| || || || || | || | || || || || | ||||| Sbjct 339409 TG---CGATTGTCGAAGTCCTCCCCTCCGAGATGGGAGTCTCCGGCCGTAGACTTGACCC 339465 Query 7506 CAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAA 7565 |||||||||| | || ||| | | | | || || || |||| || |||| ||||| Sbjct 339466 CAAAGATACCGTCCTCGATGGTGAGGATAGTTACGTCGAAACTACCGCCGCCCAAGTCAA 339525 Query 7566 AAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCG 7625 | ||||| |||||| || | | | |||| ||||| ||||| | ||| ||||| | Sbjct 339526 AGATGAGCACGTTCCGTTCCCAGCCAATCTTCTGGTCGAGTCCGTAGGTGATGGCCGCGG 339585 Query 7626 CCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCG 7685 |||| | || || || || || || ||| |||||||| || | | || || || | Sbjct 339586 CCGTCGACTCGTTGATGATGCGGAGCACGTTGAGGCCAGCGATGACTCCGGCGTCCTTGG 339645 Query 7686 TCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTT 7745 | || |||||||| || ||||| ||||||||||| || || || || |||| || || Sbjct 339646 TGGCCTGTCGTTGAGAGTCGTTGAAGTAGGCCGGCACGGTGACCACGGCGTTTGTAACAG 339705 Query 7746 TCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCT 7805 |||| ||||| |||| ||| || | || ||||||||| || ||||| || || |||| Sbjct 339706 TCTTGCCGAGGTACGCTTCGGCAGTCTCCTTCATTTTGAAGAGCACCATGGAGGAGATCT 339765 Query 7806 CTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCG 7865 | || | || |||||| || || || | || |||| |||| |||| || | Sbjct 339766 CCTCGGGGAAGAAGGTTTTCGTCTCTCCTTTGTACTCCACTTGAATCTTGGGCTT---GG 339822 Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGAC-CTGTTGGTCC 7924 ||| || ||| ||||| | | ||| | ||||| ||| || || ||| | ||| Sbjct 339823 TAGCCTCGTTGATGACCTTGAAGGGCCAGTGCTTCATGTCGCTCTGCACGCTGCT-GTCG 339881 Query 7925 GAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCT 7984 ||| | ||||| |||||||| || || || |||||||| || || ||||| Sbjct 339882 TCAAAGCGCCGACCGATGAGACGCTTCGCGTCGAACACTGTGTTCGCAGGATTTATGGCC 339941 Query 7985 GTTTGGTTCT 7994 |||||||| Sbjct 339942 ACTTGGTTCT 339951 >seq21 Length=757752 Score = 129 bits (142), Expect = 7e-25 Identities = 313/466 (67%), Gaps = 16/466 (3%) Strand=Plus/Plus Query 7628 GTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTC 7687 || |||||||| || ||||| ||| |||| || | || | || || ||||| Sbjct 737162 GTCGGTTCATTGATGATACGCAGAACATTCAAACCGGAGATTCGGCCGGCGTCCTTCGTA 737221 Query 7688 GCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC-TTT 7746 |||||||| || ||||| || || || || || || || | ||| |||||| | || ||| Sbjct 737222 GCTTGTCGCTGTGAATCATTGAAATAAGCGGGCACGGTAATGACGGCGTCCTTCACCTTT 737281 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 | | || ||| | | ||||| | || ||||| ||| | ||||| | ||| || Sbjct 737282 CCTCCCAAGA-AGGCCTCCGCCGTCTCCTTCATCTTGCCCAAGACCATAGCACTAATTTC 737340 Query 7807 TTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCG 7865 ||| | || | || ||| | || || | || || |||| ||||| ||||| | Sbjct 737341 TTCTGG-GCTGAAGGTCTTCTTCTCGCCCATGAACTCCGCTTCGATCATCGGTTTG---G 737396 Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGAC---CTGTTGGT 7922 | | ||||||||| ||| ||||| ||||| || | || || || | || Sbjct 737397 TACTCTTGTTGATAACCTTGAACGGCCAATGCTTCATGTCTGCCTGAACAGACTCATCGT 737456 Query 7923 CCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGG 7982 | ||||||| ||||| ||||| || || || || || ||||| |||| ||||||| Sbjct 737457 CG---AACTTTCGACCGATCAGACGTTTCGCGTCGAACACCGTGTTGGTGGGATTCATGG 737513 Query 7983 CTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGT 8042 | ||| || || || || || |||| || ||||| ||| | || || || || | Sbjct 737514 CGACTTGATTTTTGGCGGCATCGCCGACTAGGCGTTCGGTATCT---GTGAATGCCACAT 737570 Query 8043 ACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 | ||||| || || || || ||||| ||||| ||||||||||| || Sbjct 737571 AGGATGGAGTGGTGCGGTTGCCTTGATCGTTGGCAATAATTTCCAC 737616 >seq247 Length=116737 Score = 123 bits (136), Expect = 3e-23 Identities = 187/264 (71%), Gaps = 8/264 (3%) Strand=Plus/Plus Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 |||||| | | || ||| ||||| || || || || ||||| || || | ||| | |||| Sbjct 100031 TCAATGGTCAGCAGCGACACATCGAAGGTGCCTCCGCCCAGATCGAAGACGAGAATGTTC 100090 Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 | ||| | | |||| || | |||||| ||||| || || || || || || || Sbjct 100091 TTCTCGCCCT------TCTTGTCCAAACCGTAAGCGATGGCAGCGGCGGTCGGCTCGTTG 100144 Query 7640 ATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 || || || | || || ||| ||| || || | ||||| || || ||| ||||| Sbjct 100145 ATGATTCGCATCACCGT-CAGCCCACTGATGGTGCCGGCATCCTTGGTGGCTGCCCGTTG 100203 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 | |||||| ||||||||||| ||||| || ||||||| || || |||| || ||||| Sbjct 100204 GGCATCGTTGAAGTAGGCCGGCACCGTGACTACCGCGTGGGTCACCCTCTTCCCCAGATA 100263 Query 7759 CGATTCCGCGATATCTTTCATTTT 7782 || |||||||| || ||||| || Sbjct 100264 CGCTTCCGCGACCTCCTTCATCTT 100287 Score = 87.8 bits (96), Expect = 2e-12 Identities = 182/269 (68%), Gaps = 8/269 (3%) Strand=Plus/Plus Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 |||||| | | || ||| ||||| || || || || |||| || || | ||| | |||| Sbjct 110725 TCAATGGTCAGCAGCGACACATCGAAGGTGCCCCCGCCCAAATCGAAGACGAGAATGTTC 110784 Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 | ||| | | |||| || | |||||| ||||| || || | || || || || Sbjct 110785 TTCTCGACCT------TCTTGTCCAAACCGTAAGCGATGGCAGCGGTGGTCGGCTCGTTG 110838 Query 7640 ATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 || || || | || || || || || || | || || || || ||| | || Sbjct 110839 ATGATTCGCATCACCGT-CAACCCGCTGATGGTGCCAGCGTCCTTGGTGGCTGCCCATTC 110897 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 | ||||| ||||||||||| ||||| || ||||||| || || ||||| || || || Sbjct 110898 GGCGTCGTTGAAGTAGGCCGGCACCGTGACTACCGCGTGGGTCACCTTCTTCCCCAGGTA 110957 Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAA 7787 || ||||||||| || |||| || ||| Sbjct 110958 CGCTTCCGCGATCTCCATCATCGTGTTAA 110986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635121518453640