Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq91 104 2e-17 >seq91 Length=320879 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| |||||||||||||| ||||| ||| |||| | || ||| Sbjct 61435 ACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCGCTGAGGGTTCGGCCGTCTTCC 61376 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||||||||||||||| || || || |||||||| | || | |||||||| || Sbjct 61375 AGCTGTTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTATCCTGG 61316 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | |||| ||||| || |||| ||| ||||| || Sbjct 61315 ATCTTGGCCTTGACGTTCTCAATTGTGTCACTTGCCTCCACTTCGAGGGTAATGGTCTTA 61256 Query 34953 CCCGT 34957 || || Sbjct 61255 CCTGT 61251 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || ||||| || ||||| ||| | || | || |||||||| ||||||||||| Sbjct 60833 TTCCTTTTGAATATTGTAGTCGCTGAGGGTGCGACCGTCCTCCAGCTGCTTTCCGGCAAA 60774 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | |||||||| || ||||| |||||| Sbjct 60773 GATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 60714 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | |||| || ||||| || | || || || || ||||| ||||||||||| Sbjct 60713 CTCAATTGTATCACTTGCTTCAACTTCAAGTGTAATCGTCTTGCCCGTCAGAGTCTTCAC 60654 Query 34970 AAAGATCTGCAT 34981 ||||||||||| Sbjct 60653 GAAGATCTGCAT 60642 Score = 93.3 bits (102), Expect = 3e-14 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| |||||||| ||||| ||||| ||| | || |||| ||| Sbjct 61784 ACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCC 61725 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || || || |||||||| | || | |||||||| || Sbjct 61724 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTATCTTGG 61665 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| ||||| || || || | |||| ||||| || |||| ||| ||||| | Sbjct 61664 ATCTTGGCCTTGAC--ATTCTCAATTGTATCACTTGCCTCCACTTCGAGGGTAATGGTCT 61607 Query 34951 TTCC 34954 | || Sbjct 61606 TGCC 61603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324627977853288