Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6 122 2e-22 seq98 91.5 3e-13 >seq6 Length=1030571 Score = 122 bits (134), Expect = 2e-22 Identities = 174/240 (73%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 213726 TAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG-ATGCGGGACA 213784 || ||| | | |||||| | ||||||||| | ||| || |||| |||||| ||| Sbjct 233300 TACAGCGCATCGAATTCCTCGCCCCAGACATCGGCCAAGCCGGGACTCTCATGCGG-ACA 233242 Query 213785 CATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843 ||| |||| ||||||| || | |||| || | ||||||| || ||||| ||||| | Sbjct 233241 CATCAGGCACCAGTCCTCGGACTTCTCC-ACCCGACGCATGAAGAGATCCGGCACCCAGA 233183 Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903 | ||| ||||| || | | | | ||| || || || | || ||||||||||| | Sbjct 233182 GAGCGTAGAACAAATCACGAGCACGCTGCTCCTCTACGCCGGTATTCTTGCGCAGATCCA 233123 Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 | |||||||| | || |||||||||||||| | |||||| || || || |||||||||| Sbjct 233122 GGAAGTCAAAAACATCGGCGTGCCACGGCTCTAGGTAGATTGCGAACGCTCCCGGCCTCT 233063 >seq98 Length=303023 Score = 91.5 bits (100), Expect = 3e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || || ||||||||| | ||| ||| | || ||||||| |||| | |||| Sbjct 281505 TCATCGCGACTGATGAGCTCATTGCTGAATGTCAAGCCGGGCATGAGTCCCCGTTTTTTG 281446 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||| || | ||||| ||||| ||||||||| |||||||| | || || || Sbjct 281445 AGCCAGAAGATGGAGGCGAATGAGCCGCTGAAGAAGATCCCCTCCACCGAGGCAAAGGCC 281386 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG-AGATCCAGGAAAGCGCCCAGTCTGC 48333 || | ||||| | | ||||| || ||| |||||| || |||||||| || Sbjct 281385 ACGATGCGTTCTCCATAGGTGGCGTTGGTG-CTGCTCATCCAGCTGAGTGCCCAGTCGGC 281327 Query 48334 CTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 |||||| ||| ||| ||||| || || || || |||||| Sbjct 281326 TTTCTTCCTGACGCAAGGCATGGTGTCAATCGCGTTGAAGAG 281285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931516253648640