Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6 105 1e-17 seq98 95.1 2e-14 >seq6 Length=1030571 Score = 105 bits (116), Expect = 1e-17 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 221933 TCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACAC 221992 |||||| |||||| ||| || || | || || | | ||| ||| ||| |||| | Sbjct 233312 TCATACTTGGTATACAGCGCATCGAATTCCTCGCCCCAGACATCGGCCAAGCCGGGACTC 233253 Query 221993 -CTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTC 222051 | |||| ||||||||| | ||||| || | | | |||| |||||||||| || Sbjct 233252 TCATGCGG-ACACATCAGGCACCAGTCCTCGGACTTCTCCACCCGACGCATGAAGAGATC 233194 Query 222052 CGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTT 222111 ||| | ||| || || | || | ||| | | ||||||||||| |||||| | || || Sbjct 233193 CGGCACCCAGAGAGCGTAGAACAAATCACGAGCACGCTGCTCCTCTACGCCGGTATTCTT 233134 Query 222112 CCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGA 222161 | |||||||| || ||||||| || |||||||||||||| || |||| Sbjct 233133 GCGCAGATCCAGGAAGTCAAAAACATCGGCGTGCCACGGCTCTAGGTAGA 233084 >seq98 Length=303023 Score = 95.1 bits (104), Expect = 2e-14 Identities = 121/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905 ||||| | |||| | ||| || | ||| || || | || |||||||| | |||||| Sbjct 281345 TGGATGAGCAGCACCAACGCCACCTATGGAGAACGCATCGTGGCCTTTGCCTCGGTGGAG 281404 Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CAT 25964 || ||||| |||||||| || || || |||||||||||||||| | | |||||| ||| Sbjct 281405 GGGATCTTCTTCAGCGGCTCATTCGCCTCCATCTTCTGGCTCAA-AAAACGGGGACTCAT 281463 Query 25965 GCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 |||||| || || ||| ||||||||||| | || |||| Sbjct 281464 GCCCGGCTTGACATTCAGCAATGAGCTCATCAGTCGCGATGAGG 281507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928828301394240