Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq18 102 7e-17 seq51 87.8 1e-12 >seq18 Length=819520 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| |||||||| || | ||||| || || || || |||| ||| || Sbjct 140821 AATGCAAATTTTTGTCAAGACGCTGACCGGGAAGACTATCACACTCGAGGTGGAAGCTTC 140880 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| || ||| | || || |||||| ||||| ||||| | || ||| || Sbjct 140881 CGACACGATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGACCA 140940 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | || |||| ||| || || ||||||||||||| | | || || | |||||||| Sbjct 140941 GCAGCGGCTCATTTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAA 141000 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||| || ||||| || ||| ||||| |||| || | ||||| || ||| Sbjct 141001 CATCCAGAAAGAGTCGACGCTGCACTTGGTCTTGCGTCTGCGGGGTGGA 141049 >seq51 Length=452259 Score = 87.8 bits (96), Expect = 1e-12 Identities = 121/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 || || ||||||| || | ||| || | |||||||| |||||| || || | || Sbjct 224288 GTTTCGGGGTTGTTGCAGTTCGGGCAGAGGACAAACTTCTTGATGAAGCCGTCCAACAAT 224347 Query 34381 TCCTGTA-ACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 ||||| | || | || |||||| ||||| ||||||||| | || ||||| || || Sbjct 224348 TCCTGGAGACGGAGCGC-GTCGTGTGAGCCATTGACGATGTAGCGCTCGTTCTTCGCGTC 224406 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 || | || ||||| ||||||||| ||||||||||||| ||||| Sbjct 224407 GATCATGGTCTGCGCTCCCAGCTCGTACCCGAAGTACTTCAGCGGGT 224453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412834450228553