Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq21 138 8e-27 >seq21 Length=757752 Score = 138 bits (152), Expect = 8e-27 Identities = 311/463 (67%), Gaps = 12/463 (3%) Strand=Plus/Plus Query 282363 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 282422 |||| |||||||| || || | || |||||| | ||| | |||| || || || || | Sbjct 737160 CAGTCGGTTCATTGATGATACGCAGAACATTCAAACCGGAGATTCGGCCGGCGTCCTTCG 737219 Query 282423 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTT 282482 | ||||||| |||||||| || ||||| || || || ||||| ||||| || | || | Sbjct 737220 TAGCTTGTCGCTGTGAATCATTGAAATAAGCGGGCACGGTAATGACGGCGTCCTTCACCT 737279 Query 282483 CTTTTCCAATATAAGCGCTT-GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 282541 | ||| | | ||| || || || | ||||| || | || | ||| | |||| Sbjct 737280 TTCCTCCCA-AGAAGGCCTCCGCCGTCTCCTTCATCTTGCCCAAGACCATAGCACTAATT 737338 Query 282542 TGTTCTGGAGAATATTGCTTGGATTCATTTTGAT-ATGATA----CTTCAAAATATGGTT 282596 | |||||| || | ||| | | | |||| |||| | |||| Sbjct 737339 TCTTCTGGGC-----TGAAGGTCTTCTTCTCGCCCATGAACTCCGCTTCGATCATCGGTT 737393 Query 282597 TATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGT 282656 | ||| || ||||| || || ||||||| ||||| |||| |||||| | | Sbjct 737394 TGGTACTCTTGTTGATAACCTTGAACGGCCAATGCTTCATGTCTGCCTGAACAGACTCAT 737453 Query 282657 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTG 282716 | | || | || ||| || | ||||| || || || | || ||||| ||||| | | Sbjct 737454 CGTCGAACTTTCGACCGATCAGACGTTTCGCGTCGAACACCGTGTTGGTGGGATTCATGG 737513 Query 282717 CAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATG 282776 | |||||| |||||| ||||| || | || |||| || ||||| |||| ||||| | Sbjct 737514 CGACTTGATTTTTGGCGGCATCGCCGACTAGGCGTTCGGTATCTGTGAATGCCACATAGG 737573 Query 282777 ATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAAC 282819 ||||||| ||||| || |||||||| || ||||||||||| || Sbjct 737574 ATGGAGTGGTGCGGTTGCCTTGATCGTTGGCAATAATTTCCAC 737616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740560634905146