Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq130 78.8 3e-11 seq80 78.8 3e-11 seq11 78.8 3e-11 >seq130 Length=237799 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCC 2829 ||| |||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct 15271 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCAGTGTTCAATCC 15214 >seq80 Length=362415 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCC 2829 ||| |||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct 329963 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCAGTGTTCAATCC 329906 >seq11 Length=906959 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCC 2829 ||| |||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct 690432 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCAGTGTTCAATCC 690489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849353662545