Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq56 89.7 6e-13 >seq56 Length=427550 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146916 TTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTC 146975 ||| |||| || || ||||||| ||| | ||| ||||| || ||| |||| | || || Sbjct 126299 TTTGAGGGCGTCAACATGGTTGACGTAAATGTGGGCGTCGCCGAGGATGTGGATGAATTC 126240 Query 146976 CCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTAT 147035 || || || | ||||||| ||| || | ||| |||| || || |||||||| || || Sbjct 126239 TCCTGGTTTCAATCCGGTCAGGTGAGCAATCATACAGGTCAGGAGGGAGTAGCTCGCAAT 126180 Query 147036 GTTGAAGGGGACCCCCA 147052 ||||||||| || |||| Sbjct 126179 GTTGAAGGGCACGCCCA 126163 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 147056 CCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACT 147115 ||||||| |||| | ||||| || |||||| ||||| ||||||| |||||||||||||| Sbjct 125979 CCATGTCTGCCGAGCGCTGGTTCATCTGGCAGGAGAGTTCCCCGTTGGCCACGTAAAACT 125920 Query 147116 GGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 || | ||| || |||||||||||||| Sbjct 125919 GGGCGAACGCGTGACAAGGCGGCAGCGCCAT 125889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583477635794400