Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 1e-13 >seq36 Length=576097 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 44117 TCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCG 44176 || ||||||||| || | |||||||| |||| ||||| || ||||||||| || || Sbjct 83609 TCGTTTGGAGAAAGAATCGTCGCGTTCGCAGCGGTGGAGGGGATTTTCTTTAGCGGGTCA 83668 Query 44177 TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAAT 44236 ||||| | ||||||||||| |||||||| || | ||||| || | || || ||| Sbjct 83669 TTTGCATCAATATTTTGGTTGAAGAAACGTGGCATTATGCCGGGTCTTACCTTCAGTAAT 83728 Query 44237 GAGTTAATAAGTCGTGATGA 44256 || | || |||||||| || Sbjct 83729 GAACTCATCAGTCGTGACGA 83748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397449116683105