Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 >seq3 Length=1595396 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 179065 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTG 179124 |||||||| ||| ||||| || ||||| || ||||| ||| ||| |||||||| ||| Sbjct 353399 TCTTTGCCGCCCTGAAGACGGGTGCCAAACTGGCCACACGGCAAAAGAAGATTGATGTTG 353458 Query 179125 TTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACCG 179184 || || | |||||| | |||| ||| || || | ||||||||||| ||| Sbjct 353459 TTACTGCCGACGTAGTCTTGCGCCAGACCGACGATGGTGGACTGAAGGGAGACTTCGCCG 353518 Query 179185 TGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCATCC 179244 ||||| |||||||| || || ||||| | |||| ||||| |||||||| | || | Sbjct 353519 TGATGATAAGCCGATTTCTCGGCCACCGAACCCGCTAACTGGGCCACCTTGACTTCCTTT 353578 Query 179245 TTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTC 179281 || ||| ||||||| | || |||||||||| Sbjct 353579 CTGTCGTTACGAAGGAAGCAGGTGTAGATCACCTTTC 353615 Score = 95.1 bits (104), Expect = 1e-14 Identities = 173/247 (70%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 179037 TGTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATT 179095 |||||||||||| | | || ||| ||||| || ||| ||||| || ||||| | Sbjct 361650 TGTGAAGATGTAACGGGACTGG--CGCTGTCTTTTCCGCCCTGAAGACGGGTGCCAAACT 361707 Query 179096 GACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCA-ACTTG 179154 | ||||| ||| ||| |||||||| ||||| || | |||||| | |||| | | Sbjct 361708 GGCCACACGGCAAAAGAAGATTGATGTTGTTACTGCCGACGTAGTCTTGCGCCACAACCG 361767 Query 179155 ACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAAGCCGACTTGTCCGCCACATAT 179214 || || | | |||||||||||| |||||||| |||||||| || || ||||| | Sbjct 361768 ACGATGGGGGACT-GAGGGAGACTTCGCCGTGATGATAAGCCGA-TTCTCGGCCACCGAA 361825 Query 179215 GCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATC 179274 |||| ||||| |||||||| | || | || ||| ||||||| | || ||| Sbjct 361826 CCCGCTAACTGGGCCACCTTGACTTCCTTTCTGTCGTTACGAAGGAAGCAGGTGTAGATC 361885 Query 179275 ACCTTTC 179281 ||||||| Sbjct 361886 ACCTTTC 361892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618424215044760