Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq6 123 3e-23 >seq6 Length=1030571 Score = 123 bits (136), Expect = 3e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 79288 TACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCAC 79347 |||| | | | ||| |||| || ||||||||| || ||| || | ||| ||||| ||| Sbjct 233300 TACAGCGCATCGAATTCCTCGCCCCAGACATCGGCCAAGCCGGGACTCTCATGCGGACAC 233241 Query 79348 ATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGG 79407 |||||| |||||||||| |||||| ||| ||||||||| ||||| | ||| || Sbjct 233240 ATCAGGCACCAGTCCTCGGACTTCTCCACCCGACGCATGAAGAGATCCGGCACCCAGAGA 233181 Query 79408 GCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGA 79467 || ||| | || || |||| |||||| |||| ||| ||||| || || Sbjct 233180 GCGTAGAACAAATCACGAGCACGCTGCTCCTCTACGCCGGTATTCTTGCGCAGATCCAGG 233121 Query 79468 AAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACG 79513 ||||| | | ||||||||||||||||| || ||||| ||||||| Sbjct 233120 AAGTCAAAAACATCGGCGTGCCACGGCTCTAGGTAGATTGCGAACG 233075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548515056828240