Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 1e-13 seq107 84.2 1e-11 >seq18 Length=819520 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||| || || || || || || || || ||||| ||||| || || | | Sbjct 140821 AATGCAAATTTTTGTCAAGACGCTGACCGGGAAGACTATCACACTCGAGGTGGAAGCTTC 140880 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || ||||| |||||| | ||||| || || Sbjct 140881 CGACACGATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGACCA 140940 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||| ||||| || ||||| || | ||||| | ||||||||| Sbjct 140941 GCAGCGGCTCATTTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAA 141000 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATCAG 23842 ||| || |||||||| || | || || || || | |||| || |||| || Sbjct 141001 CATCCAGAAAGAGTCGACGCTGCACTTGGTCTTGCGTCTGCGGGGTGGATGAG 141053 >seq107 Length=284601 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 23630 CCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAA 23689 |||| | || || || |||||||| |||||||| | | || || |||| | | | Sbjct 96770 CCCTTCCAGGCAAGACTATCACTCTTGAAGTTGAGGCAAGTGATACGATTGAGAACGTCA 96711 Query 23690 AACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCG 23749 || |||||| ||||| |||||| | || || ||||| ||||| | || || || | Sbjct 96710 AAGCCAAAATTCAGGACAAGGAAGGTATTCCTCCGGATCAGCAGCGGCTGATTTTCGCGG 96651 Query 23750 GCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACAT 23809 | || ||| |||| |||| || ||| | ||||||||||| || || |||||||| Sbjct 96650 GGAAGCAATTGGAGGACGGTCGAACTCTCTCGGATTACAACATCCAGAAGGAGTCCACCC 96591 Query 23810 TACATTTAGTT 23820 | ||| | ||| Sbjct 96590 TCCATCTTGTT 96580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338003746201868