Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq56 95.1 9e-15 >seq56 Length=427550 Score = 95.1 bits (104), Expect = 9e-15 Identities = 119/163 (73%), Gaps = 8/163 (5%) Strand=Plus/Minus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 ||| ||||||||||| ||||| || | || ||| | |||||| ||| |||| || | Sbjct 125789 GGGATTCCAGGCGCAGACGATCATTCTCCGGTCGTTTGGGTTCTTCTTGATTGTCTCGAT 125730 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATG----TCCGTGT 27499 | |||| | ||||| || || || |||| | ||| || | |||| ||||||| Sbjct 125729 GACGTTCTTGAGCTGGTCGACGCCTTTCCCTGTGTAATC----CGCATGACAGTCCGTGT 125674 Query 27500 ACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCC 27542 |||| || |||||||||| ||| ||||||||||| || || || Sbjct 125673 ACTCCGCGCCGAAATGCCGCCACTGGAACCCGTAAACTGGGCC 125631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369500800712651