Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq2377 125 1e-23 >seq2377 Length=22370 Score = 125 bits (138), Expect = 1e-23 Identities = 111/139 (80%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| | ||| | ||| ||||| |||||||||||||| ||||||||||| Sbjct 338 TTCCACCTCTCAATCTCAGTACTAAATGCAAAGTAGATTCTTTCTGAATATTATAATCAC 279 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | | |||||| ||| || |||||||| ||||||||||| || | ||| || || |||| Sbjct 278 TCAAACTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAG 219 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| ||||| |||||||| Sbjct 218 GAATCCCTTCCTTATCTTG 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743493684838400