Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq780 93.3 6e-14 >seq780 Length=27146 Score = 93.3 bits (102), Expect = 6e-14 Identities = 99/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 19364 GTATAATTTAAAATAGGATCATCTTCTGGTCTAAAAATTTTATTAAGTATTGGTGGTTGG 19423 |||||| | | |||| ||||||||| ||||||||||||||| | ||| ||| | | Sbjct 13554 GTATAACTAAGAATACTATCATCTTCAGGTCTAAAAATTTTACGA-GTAATGGCATTGAG 13612 Query 19424 TTAACA-AAAATATATCTAGGACTTGCTGCATCTTTTCCTCCAGAAAGTCTCGTGCCAAA 19482 || |||||||||| |||||| ||||||||||||||||||| | || || ||||| Sbjct 13613 ACAAGTGAAAATATATCGAGGACTAGCTGCATCTTTTCCTCCAGCTAATCGAGTACCAAA 13672 Query 19483 TTGGCCAT 19490 ||| |||| Sbjct 13673 TTGACCAT 13680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679784488166400