Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2628 82.4 5e-11 >seq2628 Length=67642 Score = 82.4 bits (90), Expect = 5e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 23104 AATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAACGC 23163 ||||| ||||||||||||||||| ||||| |||| ||| || |||||||| |||||||| Sbjct 41821 AATCCCTTTGATTTCATGGATAATATTAGTATTGGAGGAAAGACAAACTTTTTTGAACGA 41880 Query 23164 CGTGTGAGTGAATATCAG 23181 || || | ||||| ||| Sbjct 41881 CGAGTAGGAGAATACCAG 41898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356218317578560