Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq12 82.4 1e-11 >seq12 Length=12817 Score = 82.4 bits (90), Expect = 1e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 |||||||| || ||||||||||| || || || || || || |||| | | || || Sbjct 837 CGAGATAATATTCAAGGAATCACTAAACCTGCCATACGACGATTGGCAAGAAGAGGAGGT 896 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 |||||| | |||||||||| | |||||||| | | | ||||| || || || | Sbjct 897 GTCAAGAGAATCTCTGGATTAATTTATGAAGAAACCAGAGGAGTTTTAAAAATTTTTTTG 956 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | || || ||||| | ||||| || || |||||| |||||||| || Sbjct 957 GAAAATGTAATTAGAGATGCCGTAACTTATACAGAACATCGTAAACGAAAGACTGTTACT 1016 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 | |||||| | |||||||| |||| | ||||| Sbjct 1017 GCAATGGATGTAGTCTATGCTCTGAAGAGACAAGG 1051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071981639360