Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2377 129 6e-25 >seq2377 Length=22370 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| |||||| | || |||||| | || ||| | ||| | ||| | | | Sbjct 110 ATGCAAATTTTTGTTAAAACACTTACCGGAAAAACCATTACCCTTGAAGTTGAACCTAGC 169 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| ||| ||| || || |||||||| ||||| || ||| Sbjct 170 GATACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAGGAAGGGATTCCTCCAGACCAA 229 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| | || |||||| | ||||||| |||| | || || ||||| Sbjct 230 CAACGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGCAGAAGTTTGAGTGATTATAAT 289 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| |||||||||||| | ||| | || |||||| | ||||| |||| Sbjct 290 ATTCAGAAAGAATCTACTTTGCATTTAGTACTGAGATTGAGAGGTGGAA 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478641338854400