Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2377 132 4e-26 >seq2377 Length=22370 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||| | || |||||| | |||||| | ||||| || | | | Sbjct 110 ATGCAAATTTTTGTTAAAACACTTACCGGAAAAACCATTACCCTTGAAGTTGAACCTAGC 169 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || ||| ||| ||| || || ||||| || ||||| || ||| Sbjct 170 GATACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAGGAAGGGATTCCTCCAGACCAA 229 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | | |||| | || || ||| | ||||||| ||||| | || |||||||| Sbjct 230 CAACGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGCAGAAGTTTGAGTGATTATAAT 289 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||| ||||||||||| | |||||||| | ||||||||||| ||| Sbjct 290 ATTCAGAAAGAATCTACTTTGCATTTAGTACTGAGATTGAGAGGTGGA 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429917555745600