Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2489 84.2 3e-11 >seq2489 Length=37580 Score = 84.2 bits (92), Expect = 3e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 110272 ACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTG 110331 ||| |||| || | |||||| || || | |||||| || | ||| ||||| | | Sbjct 24551 ACAAATTTTGGTAAAGCAATGGATGCCAAATTGCAGACCGCAGTTTCGTCAGCATTCGAA 24492 Query 110332 TATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391 ||||| | |||||| ||||| | || | ||| || || | ||| | |||||| Sbjct 24491 TATTCTATAATTTCTGTACATAGATTACTGCACTTTATAGTTCCAACGTTTTGCTGATTT 24432 Query 110392 GATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGAC 110451 ||||| ||||||||||||||||| | ||| ||||| ||| ||||| | ||||| Sbjct 24431 GATTTACTATTGCATGCATCCTTATACAACATATATGGTACACCTGTTTCAATTTGTGAA 24372 Query 110452 TTGAGAATGGCCTTCCATA 110470 || | ||| || | ||||| Sbjct 24371 TTTATAATAGCGTGCCATA 24353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588950085056000