Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1980 192 4e-43 seq1444 179 2e-39 seq2377 156 3e-32 seq1811 132 3e-25 seq2489 125 5e-23 seq1186 111 1e-18 seq780 102 5e-16 seq1640 98.7 6e-15 seq1290 98.7 6e-15 seq3219 86.0 4e-11 >seq1980 Length=651 Score = 192 bits (212), Expect = 4e-43 Identities = 339/486 (70%), Gaps = 6/486 (1%) Strand=Plus/Minus Query 475691 CAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATG 475750 ||| | ||||| ||||| | || || || || || ||||| || ||||| | || || Sbjct 608 CAAATTCATGATGTTGTTTTGGTTGGTGGATCTACTAGAATCCCTAAAATTCAAAAATTG 549 Query 475751 CTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTT 475810 | ||| | |||||||||||||| || ||| | || | ||||||||||||||||| Sbjct 548 TTGTCAGATTTCTTTAATGGTAAAAAATTGAATCACAGCATCAATCCTGATGAAGCTGTA 489 Query 475811 GCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAAT 475870 || ||||| || ||||| ||||| || ||| | ||| | | || || | | Sbjct 488 GCTTATGGTGCCGCTGTTCAAGCCGCAATTATGAGTGGTGACCAAAGTGAAAAGGTTCAA 429 Query 475871 AATATTGTACTTGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGAT 475929 || | || |||||| | || || || || || || || | |||| ||| | | Sbjct 428 GATCTATTA-TTGTTGGATGTTACACCTCTATCTTTGGGAATCTGCACAGCTGGTGATGT 370 Query 475930 TATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAA-AAGTATTTT 475988 ||| |||| || | || |||||| | | || || | ||||||| ||| || |||| | Sbjct 369 CATGTCTAAAATTGTAGAAAGAAATTGTACAATTCC-TACAAAAAAACAACAAATATTCT 311 Query 475989 CCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAAT 476048 | || ||| | ||||||||||| | || || || ||||| | ||||| ||| || | Sbjct 310 CAACGTATGCAGATAATCAAACTGCAGTTACTATTCAAATTTACGAAGGAGAACGACCAA 251 Query 476049 TCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA-GGTATTCCTCCTGCTCCC 476107 | |||||||| ||| || | || |||| | ||| | || || || ||||| || Sbjct 250 TGACTAAAGACAATCACTTGTTGGGTCGTTTTGA-CTTAACCGGAATACCACCTGCACCA 192 Query 476108 AGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTT 476167 |||| |||||||||||||||||||| |||||||||||||| || |||||| | || || Sbjct 191 CGAGGTGTTCCTCAAATTGAAGTTACCTTTGATATTGATGCTAACGGTATTATGAAAATT 132 Query 476168 ACTGCT 476173 |||||| Sbjct 131 ACTGCT 126 >seq1444 Length=49888 Score = 179 bits (198), Expect = 2e-39 Identities = 642/990 (65%), Gaps = 19/990 (2%) Strand=Plus/Minus Query 475358 GTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT- 475416 |||| | |||| |||||||| | ||| | || |||||||| |||| | ||| | || Sbjct 46254 GTAAAATCAACGGCTGGAGACACTCATTTGGGAGGTGAAGACATTGACGAGAGATTAGTG 46195 Query 475417 -ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTA 475475 | || || || ||||||| | | |||| | || ||| || | | | | Sbjct 46194 CAGCAC--TGCGTCCAAGATTTTCAAAAGAAACACAAGAAAGATATTACTGGAAATAGAA 46137 Query 475476 AAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTA 475535 ||| | | ||| | | ||||| || |||||||| || ||| | | || |||| Sbjct 46136 GAGCTATGCGTCGTTTGAAAACTGAATGCGAACGTGCCAAACGAAATTTATCCTCTGAAT 46077 Query 475536 CTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTA 475595 | ||||||| | | | || || | ||||| || || || ||| | ||| || | Sbjct 46076 CGCAAACTATAATCAACATAGACTCAGTGTTTGATGGTATCGACTATCAGACTACCATGA 46017 Query 475596 CAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTG 475655 | |||| ||| |||||| | || |||| | || | | ||| | || || || | Sbjct 46016 CTCAAGCTAGATTGGAAGATTTATGCAATGATATATTCACCAGCACACTCGACCCGGTCG 45957 Query 475656 AACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAG 475715 | ||| | | ||||| | |||| ||| ||| | || || ||||||||||| | Sbjct 45956 ACAAAGCATTGCGTGATTCAGGATTTGATAAAAGTCAAATACACGATATTGTTCTTGTTG 45897 Query 475716 GAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAA 475775 | ||||| || ||||||||||||| | ||||||| || ||||||||||||| Sbjct 45896 GTGGTTCTACTCGAATTCCAAAAATTCAAAGTTTGCTTTCTAAATTCTTTAATGGTAAAA 45837 Query 475776 AGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 | |||||| | || | ||||| || ||||| || || ||||| || || || ||||| | Sbjct 45836 AATTAAATCATAGCATTAATCCAGACGAAGCCGTCGCGTATGGTGCGGCAGTTCAAGCTG 45777 Query 475836 CTATTTTATCAGGTCAATCAGA-CGAGAAACT--AAATAATATTGTACTTGTTGACGTAA 475892 | ||| | | || | |||| | || ||| | || |||||| | |||||||| Sbjct 45776 CGATTATGGCTGG-CGATCAAAGTGAAAAAGTTCAAGATTTATTGT--TACTTGACGTAG 45720 Query 475893 CTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAA 475952 |||| | || | || || ||| || | |||||||| ||||||| | | Sbjct 45719 CTCCTTTATCGATGGGCATTACAACTTCAGGCTCTGTAATGACTAAAATTATTGAACGTA 45660 Query 475953 ATACTCCTA-TCCCATGCAAAAAATCAAAAGT-ATTTTCCACTTATTCTGATAATCAAAC 476010 |||| ||| ||||| | ||||| ||| ||| | || || | ||||| ||| | Sbjct 45659 ATACCACTATTCCCA--CCAAAAAGATGCAGTCGTTTACGACGTACGCCGATAACCAACC 45602 Query 476011 AACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACT 476070 | || | || |||| | |||||| ||||| || | ||||| ||| | | | Sbjct 45601 TGCAGTTTCAATTGAAATTTATGAAGGAGAAAGGCCGTTGTCAAAAGACAATCATTTATT 45542 Query 476071 TGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGT 476130 |||| ||| || | ||||| ||||| | ||| ||||| | || || | ||||| Sbjct 45541 AGGAAAATTTGATTTAACTGGTATCCCTCCGGGTCCAAGAGGCGGACCCAAAGTAGAAGT 45482 Query 476131 TACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC-TTGTGATAAATCTAGTA 476189 || |||||||| || || ||||||||| | || ||||| || ||| |||| | Sbjct 45481 CACATTTGATATGGACGCTAATGGTATTTTGAAGGTTACGGCAGAGTG-TAAAGAAGCCA 45423 Query 476190 ACAAGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTC 476249 || | | ||| || ||| |||||| ||| | | | | || || | ||||| Sbjct 45422 ACCAAAAAAAAGATTTAATTATTACCAACGA---AAAAAAAAGTTCTCAATCAGAAATTG 45366 Query 476250 AACGTATGGTTGATGAAGCCAAAGAGTTTGAAGAAGCTGATAACAAGAGAAAAGCTGCTA 476309 | | |||||| |||| || ||| | |||||| ||| ||||| | | |||||| | | Sbjct 45365 ACAGAATGGTTAATGAGGCTAAAAAATTTGAAAAAGAGGATAATATTAAAAAAGCCTCAA 45306 Query 476310 TTGATGCAAAGAATGAACTTGAAAATTATG 476339 | || || || |||||||| || || |||| Sbjct 45305 TCGACGCTAAAAATGAACTGGAGAACTATG 45276 Score = 86.0 bits (94), Expect = 4e-11 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || || || ||||| || || ||| || || || | ||| | || Sbjct 46911 GCAATAGGAATCGACTTGGGAACAACATATTCTTGCGTTGCAGTATATCAACACAATAGT 46852 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| | || || || |||| ||||| |||||| || || ||| ||| Sbjct 46851 GTCGAAATTTTGGCAAACGATGTTGGTACAAGAACGACACCAAGTTACGTGAGTTTCACT 46792 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || |||| | |||||||| ||||| || | || |||||||||||| | | ||| Sbjct 46791 GACGTTGAAAGATTAATTGGAGACGCTGCCAAGAACCAGGCTGCATCTAATACAGCAAAT 46732 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATT 474545 || |||| |||| |||||||| |||||||| |||| Sbjct 46731 ACAATTTACGATGTAAAAAGATTAATTGGTCGAAATT 46695 >seq2377 Length=22370 Score = 156 bits (172), Expect = 3e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 480561 AGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCT 480620 ||||| | ||| | ||| |||||| || |||||||||| | | ||||| |||| Sbjct 321 AGTACTAAATGCAAAGTAGATTCTTTCTGAATATTATAATCACTCAAACTTCTGCCATCT 262 Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680 || | ||| || ||||||||||| | ||||||||| || |||||||| |||||||| ||| Sbjct 261 TCCAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATCCCTTCCTTATCT 202 Query 480681 TGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTT 480740 ||||| ||| ||| ||| |||||| ||||| | || | |||||||||||| ||| Sbjct 201 TGAATTTTTGCTTTTACATTTTCAATTGTATCGCTAGGTTCAACTTCAAGGGTAATGGTT 142 Query 480741 TTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || ||||| |||||||| Sbjct 141 TTTCCGGTAAGTGTTTTAACAAAAATTTG 113 >seq1811 Length=36824 Score = 132 bits (146), Expect = 3e-25 Identities = 319/480 (66%), Gaps = 16/480 (3%) Strand=Plus/Minus Query 475698 ATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCAT 475757 ||||| | ||| | ||||||||||| || | ||||| ||| | || || | || | Sbjct 8551 ATGAAGTCGTTTTGGTAGGAGGTTCTACTCGTATTCCTAAAGTCCGAAAACTTGTTCAAC 8492 Query 475758 CATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAA---ATCCTGATGAAGCTGTTGCAT 475814 || ||| ||||| |||| | | |||| || | || |||||||| |||||| Sbjct 8491 AATTTTTGAATGG---AAAGGAACCAGCCAGTGGAATCAACCCCGATGAAGCCATTGCAT 8435 Query 475815 ATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGA--GAAACTAAATAA 475872 |||||||||| || ||||| | | |||| ||| |||| | | || | Sbjct 8434 ATGGAGCTGCAGTTCAAGCTGGTGTTTTGAGTGGTG---CAGATGGTGGTGAC-----AG 8383 Query 475873 TATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTAT 475932 |||||| | ||||||| | ||| | | || ||| | ||||| ||||||||| | || Sbjct 8382 TATTGTTTTAATTGACGTCAACCCATTGACTTTGGGTATCGAAACTGTTGGAGGGGTGAT 8323 Query 475933 GACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCAC 475992 ||| || ||||| |||||| | | ||| ||| ||||||| | || ||||||| || Sbjct 8322 GACAAAAGTTATTCCCAGAAACAGTGTTATACCAACCAAAAAAACTCAAATATTTTCTAC 8263 Query 475993 TTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCAC 476052 | ||||||| ||| ||||| || ||| || ||||||||||||| | | Sbjct 8262 CGCTGCTGATAACCAAGATACTGTTACTATCAGTGTCCATGAAGGTGAAAGATCAATGGT 8203 Query 476053 TAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGG 476112 ||||| || | | | || | || || | ||||||| || || ||||| Sbjct 8202 CAAAGACAACCATCTATTGGGCAAATTCGATTTGAAAGGTATCAAGAAGGCACCGAGAGG 8143 Query 476113 AGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 ||||| |||||||| ||||| ||||| || || || || ||||||| | ||||| || Sbjct 8142 TGTTCCACAAATTGAGGTTACATTTGAAATGGACGCTAACTCTATTCTTCACGTTACCGC 8083 Score = 86.0 bits (94), Expect = 4e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 |||||||||||||| ||||||||| ||||||||||||| || ||||| || || | |||| Sbjct 9184 ACTGTTCCAGCATACTTTAATGATGCTCAACGTCAAGCTACAAAAGACGCAGGTAAAATT 9125 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840 || || || ||||| | ||||| || ||||| Sbjct 9124 GCTGGACTAAATGTCAAGAGAATTATCAACGAACC 9090 >seq2489 Length=37580 Score = 125 bits (138), Expect = 5e-23 Identities = 223/325 (69%), Gaps = 13/325 (4%) Strand=Plus/Minus Query 592280 ACTGGATAATAATTTACATCAATAATATTATTTAAATTTCTTGTAATAATTCTTGCGACC 592339 || ||||||||||| | ||| ||||| || || | ||| | ||| | |||| | Sbjct 24650 ACAGGATAATAATTGATATCTATAATTTTGTTGAGGTTTTTGACAATGA--CTTGAGTAA 24593 Query 592340 TTGTA--CAATTTATTATAATCAAACTCTGGAACACCGTTTTCATGAATAATAAATTTAG 592397 || | |||||| ||| ||||||||||| || || | | || |||||| | Sbjct 24592 TTCTTTCCAATTTTTTAAAATCAAACTCT---------TTATCTTTAGAAACAAATTTTG 24542 Query 592398 GTAAACAAATTGATGACAAATTACAAACTGCATATTCATCTGCAGATGAGAATTCTACAA 592457 ||||| ||| |||| |||||| || || ||| ||| || ||| || |||||| || Sbjct 24541 GTAAAGCAATGGATGCCAAATTGCAGACCGCAGTTTCGTCAGCATTCGAATATTCTATAA 24482 Query 592458 TTTCACAACAAAGATTTGAGCCATTAATTACGCCTATATTAATCTGATTTGATTTTTGAT 592517 |||| ||| ||||| || || || || | || |||||||||||| || Sbjct 24481 TTTCTGTACATAGATTACTGCACTTTATAGTTCCAACGTTTTGCTGATTTGATTTACTAT 24422 Query 592518 TGATAGCATCTTTAAACAATATGTATGGTACACCTGTTTCAATTTGTGTTTCCATTATTT 592577 || ||||| ||| |||| || ||||||||||||||||||||||||| | || || Sbjct 24421 TGCATGCATCCTTATACAACATATATGGTACACCTGTTTCAATTTGTGAATTTATAATAG 24362 Query 592578 TAAACCATAAATCTCTTGCTTTGAT 592602 ||||||| |||||||||| || Sbjct 24361 CGTGCCATAAAACTCTTGCTTTTAT 24337 Score = 107 bits (118), Expect = 1e-17 Identities = 500/779 (64%), Gaps = 42/779 (5%) Strand=Plus/Minus Query 591503 GCCGGTTTACCTCTTAAATAATACATTCCCGTTTTAAGTCC--TTTGCGATATGCATAAA 591560 || |||||| ||||||||||||||| || || || | || ||| | | || | ||| Sbjct 25818 GCAGGTTTAGTTCTTAAATAATACATGCCAGTCTTCAAACCCTTTTTCCAAGTGTAAAAA 25759 Query 591561 A-TAGACATGAATTTAATTTGACAAAATCTGGTTTCTCAATAAATATATTCATACTTTGT 591619 || || || | ||||| || ||| ||| | | |||| ||||||||| ||| Sbjct 25758 TGTAAACTTG---TCAATTTAGCATAATTTGGACTTTGAATATGAATATTCATAGATTGA 25702 Query 591620 GTTTGATCTATAAATGGAGCTCGATCAGCTGCCATATCAATGATAGATTGTTGTGGAATT 591679 ||||||||||| | ||||| ||||||||||||||| || || ||| ||||| ||| Sbjct 25701 CTTTGATCTATATAAATAGCTCTATCAGCTGCCATATCTATAATTAATTTCTGTGGTATT 25642 Query 591680 TCCCAAACTGTTCTATAAATATTTTTAATATTTTGTGGTATATTNNNNNNNNNTGCT--A 591737 ||||| || ||| | || | || || | ||| | ||| ||| || | | Sbjct 25641 TCCCATACAGTTTTGTACAAATCCTTCA-ATTCT-TGGCTAATTTCATCAATATGTTGAA 25584 Query 591738 TGGATCCTTGATAATATTTTATAAG---ATCCACCATATCTGAATTCCATAAACCGAGTT 591794 | || || |||| | ||| || || ||| | |||||| | ||| | || Sbjct 25583 TTGAACC---ATAACCTGATATCAGTTTATTTCTCATGGTTTTATTCCAAAGACCTAATT 25527 Query 591795 CCATTAAATCTTTAATTAGATATTTGTTAATGACATAATAATCTCCTGCTAAAGTACTTC 591854 |||||||| | | || || || | || | | | || || | |||| || Sbjct 25526 GAGTTAAATCTCTCAATAAATGCGAATTGACTACTTGAAATTCACCAGATAAA--ACCCG 25469 Query 591855 TTGAA--TAAATATTTTCGGTAAATGGTTCAATACATTCATTATATCCTTTAATTTGAGA 591912 ||| |||| || ||||||| |||||| |||| |||| |||| |||||||| Sbjct 25468 ACGAACGTAAAGGTTACTTGTAAATGCTTCAATTGATTCGTTATTTCCTAAAATTTGAGC 25409 Query 591913 TGTACTTGCTGTTGGCATACATG-TAGTAGTTAAACTGTTTCTAACACCATATATCATTA 591971 || ||||| |||||| || || || ||| ||||||||||||||| |||| | Sbjct 25408 CGTTGACGCTGTAGGCATAGGTGATAACAG-CAAAGAATTTCTAACACCATATTTCATAA 25350 Query 591972 TCTGTTCCCGAAGAGTTTTCCAATCCCACATTCCACTTAATTTATCTTCACCAAGATTCC 592031 || || | | | |||||| ||| || | |||| | || | | || Sbjct 25349 CAAGTCTACGTAAATCATCCCAATCGTACAAACC-TTCAATTGGTTTTTTC-----TCCC 25296 Query 592032 ATAAATCAAACTGGAATTTACCTTTTGAAAGTGGACTTCCCCAAAAGGTTTCATATGGAC 592091 |||||||||| || ||| |||||| | ||| |||| |||||||||||||| Sbjct 25295 ATAAATCAAATTGAAATAAACCTTTGCTGATTGGTGATCCCTGGAAGGTTTCATATGGTT 25236 Query 592092 CAGATTCTTTGGCCATTTGTAATGATTCTGTCAT----TGTTCCAAAATATATAGTTTCA 592147 |||| ||||| || | | || || | || | || | || ||||||||| Sbjct 25235 CAGAATCTTTAGC----TAGCAGCATACTTTGATAAACCGCAGCATAGTAAATAGTTTCA 25180 Query 592148 AATATTTTCCTATTAAGATCTCGAGCAATATCAGAATCAAATGGAA---TTTTAAATATA 592204 |||||||| |||| | ||| ||| | | | | |||||||| | |||| | Sbjct 25179 AATATTTTTTTATTCAAATCCATAGCTTTTTTACTAGTAAATGGAAAACGCATCAATACA 25120 Query 592205 GCAAACACATCGGCTAATCCTTGTACACCAACGCCAATAGGTCTATGGCGTAAATTTGA 592263 ||||| ||||| || || || || |||| ||||| || | ||| ||||| ||||| Sbjct 25119 --AAACA-GTCGGCCAAGCCCTGAACTCCAATTCCAATTGGACGATGTCGTAAGTTTGA 25064 Score = 87.8 bits (96), Expect = 1e-11 Identities = 155/222 (70%), Gaps = 13/222 (6%) Strand=Plus/Minus Query 592693 TGGACACATAAGTGACCAATTTTCATCTTTTTCAACACGATCCATGAAAATATTATTAAT 592752 |||||| ||||||| |||||||||||||||||| ||||| ||| || | || | || Sbjct 23337 TGGACAAATAAGTGTCCAATTTTCATCTTTTTCTACACGTCTCATAAACAAATCAGGTAT 23278 Query 592753 CATTAATCCAAGGAATAAATCTCTGGCTCTTTCCGTTTC---AGCACCAGTATTTTTCTT 592809 | ||| || |||||||||||| | ||| ||||| || |||| |||| | Sbjct 23277 CCACAATGCATAGAATAAATCTCTCG---TTTTGGTTTCATTAGAACCAATATTAGTGCG 23221 Query 592810 TAGATCAAGGAAGAAAAATATATCACCATGCCAAGGTTC--AATAAATACCGCAAATGAA 592867 | ||| || ||| |||||| ||||||||||||| ||||||| || | || Sbjct 23220 CAATGTAAGAAAATCAAAAATATCAGCATGCCAAGGTTCTAAATAAAT--GGCGATTGCT 23163 Query 592868 CCAGCTCTT---TTACCACCTTGATTCGCATATCTGGCTATG 592906 || | |||| ||||||||||| | |||||| ||| || Sbjct 23162 CCGGGTCTTTTGTTACCACCTTGGTCTACATATCGAGCTGTG 23121 >seq1186 Length=49523 Score = 111 bits (122), Expect = 1e-18 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 296071 AGAATTGGAAGATGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATG 296130 ||||||||||||||||||||| |||| || || || ||||||||| || || ||| Sbjct 45869 AGAATTGGAAGATGGATTGATTTTAAAAACGATTACAAAACAATGTATTGTTCTTACATG 45928 Query 296131 GAATCTGTTATTTGGTCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTAT 296190 ||||| ||| ||| |||||| || | || | |||| | | || | | |||||| Sbjct 45929 GAATCAGTTTGGTGGATATTTAAGGAAATGTACAACAAGGGACTCATCTATTGTGGTTAT 45988 Query 296191 AAAGTTATGCCTTATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAA 296250 ||| ||||||| | |||||||||||| ||| || |||| |||| || || |||| Sbjct 45989 AAAATTATGCCATTTTCTACTGGTTGTTGTACTCCTCTATCCAATTTCGAAGCTGGACAA 46048 Query 296251 AATTATAAA 296259 |||| |||| Sbjct 46049 AATTTTAAA 46057 >seq780 Length=27146 Score = 102 bits (112), Expect = 5e-16 Identities = 301/454 (66%), Gaps = 25/454 (6%) Strand=Plus/Plus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 ||||| ||||||||||| |||||||| |||||||| || | | || ||||| || Sbjct 13464 CCAGTTCCAATACCTTCACAACCATTAACCAAAATCATGGGTAAAATGGGGACATAGTAT 13523 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGATG--TTGCAATAC-ATCAAAATCATGT 355365 ||||| | | | |||| ||| | || | ||||| |||| ||| || Sbjct 13524 TTGGGTTCTGTTTTAAAAGTATCGTCATACGTATAACTAAGAATACTATCATCTTCAGGT 13583 Query 355366 TGTATGAAAATATATTTAGTTAATTG-ATTGAGTTGTGTGAAGATATATCGTGCACTTGC 355424 | ||||| | ||| ||| | |||||| ||||| |||||||| | ||| || Sbjct 13584 C---TAAAAATTTTACGAGT-AATGGCATTGAGACAAGTGAAAATATATCGAGGACTAGC 13639 Query 355425 ATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTAT 355484 |||||| |||||| ||||| ||||||||||||||||| || | ||||| ||| || Sbjct 13640 TGCATCTTTTCCTCCAGCTAATCGAGTACCAAATTGACCATTTGGCATTAATAGATTAAT 13699 Query 355485 GTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGTTTCAGTCATTGACT--GT 355542 || ||||| ||||| ||| || |||| ||||| || || | ||| ||| | Sbjct 13700 ATTATTACTGCCAACGAAATCATGAGCCAAATTTATAATTGTGGCCATCA--AACTTACT 13757 Query 355543 TCTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATT 355602 || || ||||||||| | | || | ||| | ||| ||||| | ||||| | | Sbjct 13758 TCGCCGTGATGATATGCCGATAATTCAGCAACAGAACCAGATAATTGTGCAACTTTTAAT 13817 Query 355603 TCTTCTTTAT-AAATACCTTCTTCCTCTGAACCA----TACAATACTTTTCTTTGAGATG 355657 ||| ||||| |||| ||| | |||| || |||| |||||||| ||| | Sbjct 13818 TCT--TTTATCAAAT------TTCTTTTGAAACAAGTGTACATAACTTTTCTCTGACCAG 13869 Query 355658 GTTTAAGACCGTCAGCTATGTTAGGTATTGATCT 355691 | |||| || ||| | | ||| |||||||| Sbjct 13870 GCTTAAACCCATCAACCAAAGAAGGGATTGATCT 13903 Score = 95.1 bits (104), Expect = 8e-14 Identities = 122/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 356436 TCTTACATTTAGTGGTTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAAC 356495 ||||||||| | ||| ||| ||| || |||| ||||||| || | |||||||| Sbjct 14558 TCTTACATTCAAAACTTTACCTCGTAACGGAAAAACACCATAAAGATTACGCCCGACAAC 14617 Query 356496 ATTTAATCCAGACATAGCAAATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTACA 356555 | ||||||| | ||||| | ||| || ||||| ||||| || | ||||| |||||| Sbjct 14618 AGATAATCCACTTACAGCAAGCGTTTTCGCCGAATCCCCTTCTGTTAAAATTAGAGTACA 14677 Query 356556 TTTA-TATCCTTCTTTTGTTCCAGCTTTATGAGCATTATATAATTT 356600 ||| || || |||||||||||| |||| ||||| | |||||| Sbjct 14678 ATTAATAGAATT-TTTTGTTCCAGCATTATTAGCATCTTCTAATTT 14722 >seq1640 Length=44113 Score = 98.7 bits (108), Expect = 6e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 480638 AAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGAC 480697 |||||| | |||||||||||| ||||||||||| || || |||||||| || || || Sbjct 44113 AAAAATTAAACGTTGTTGATCTGGAGGAATTCCCTCTTTATCTTGAATTTTCGCCTTAAC 44054 Query 480698 AGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTT 480757 | ||||||||||||| | | | |||||| |||||||| || || || | ||| || Sbjct 44053 ATTTTCAATAGTATCACTAGGCTCAACTTCAAGAGTAATAGTCTTTCCAGTTAAAGTTTT 43994 Query 480758 AACGAAAATTTG 480769 ||| || ||||| Sbjct 43993 AACAAATATTTG 43982 >seq1290 Length=30651 Score = 98.7 bits (108), Expect = 6e-15 Identities = 211/310 (68%), Gaps = 13/310 (4%) Strand=Plus/Minus Query 269140 GCTCTAGAGTGAGTTTTATCGCCCACCATTTGTTTTAAACGCTGATAATATGTCGGACCA 269199 |||| ||||||| |||| || | ||||| ||||||||||| |||||||| || || ||| Sbjct 15183 GCTCGAGAGTGAATTTTGTCATCGACCATGTGTTTTAAACGTTGATAATAAGTGGGCCCA 15124 Query 269200 ATAAATATTTTGACATGC-ATTTTTTCTCCCGTCATACCATTTGTCATTGTTTCATTTCC 269258 ||||||| ||||| | | |||||| ||| || | |||||| |||| ||| ||||| Sbjct 15123 ATAAATA-TTTGAGAAACTATTTTTCGTCCAGTGAAACCATTATACATTACTTCGTTTCC 15065 Query 269259 CC----ATGCTTCATATCCGTATGAAACTAGTTCATCATTTATTTTATTAATATCTAC-- 269312 | ||| | ||| || | | | | | || |||||| | | | || Sbjct 15064 TCTGAGATGGT---AATCAAAAT-CAGCCAATAGAGCAGATATTTTTTGTACGTTGACAG 15009 Query 269313 -ACCTGTAAATGGTGTCGCATCACCATATACTCCTTTAATAGCACATACTTTTCCTAATA 269371 | | |||| || || ||||||||| | |||| | | ||||| || || ||| | Sbjct 15008 TATCGTTAAACGGAGTTGCATCACCAACTTCTCCCATTAGAGCACTAACCTTCCCTTGCA 14949 Query 269372 GACATTCAATCAATTGTCCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAATAA 269431 |||||||||||| |||||||| ||||| | ||| || | ||| ||||| || | Sbjct 14948 AACATTCAATCAAATGTCCAATTGTCATTCTCGATGGAATTGCGTGAGGGTTAATGATTA 14889 Query 269432 TATCTGGCAC 269441 | ||||| || Sbjct 14888 TGTCTGGTAC 14879 Score = 89.7 bits (98), Expect = 3e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 ||||| ||||| ||||| | || || |||||||||||||| |||||||||||||| || Sbjct 17155 GGTATACCTCCAGCTCCACGCGGTGTGCCTCAAATTGAAGTCACTTTTGATATTGACGCT 17096 Query 476150 AATGGTATTCTTAATGT 476166 ||||||||| ||||||| Sbjct 17095 AATGGTATTGTTAATGT 17079 Score = 86.0 bits (94), Expect = 4e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 271974 ACGAGGAGATTGATTATGATCTGGGAATGGAATGTTAGACGAAATTAATCCCAAAATCAT 272033 ||| ||||||||||| ||||||||||| ||||| |||| | | || |||||| ||||| Sbjct 14155 ACGTGGAGATTGATTGTGATCTGGGAAAGGAATAATAGAAGCACATACTCCCAATATCAT 14096 Query 272034 ACATGGATGTATTTCACAATGAGTATA 272060 | || || ||||||||||||||||| Sbjct 14095 TGACGGGTGAATTTCACAATGAGTATA 14069 >seq3219 Length=15456 Score = 86.0 bits (94), Expect = 4e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 361652 ATGGCATCAATTTCATCAATTACTACCATATATGTAGGAGATTTATCGCCATATTTTTTC 361711 || ||||||||||| |||| | || || | | ||| ||||| ||| ||||||| Sbjct 1829 ATTGCATCAATTTCGTCAAAAATTATGATGTGTAAAGGTGATTTTATACCAAATTTTTTT 1770 Query 361712 -CATGCATCTTTAGCGGCTTTAAAAATATCTCTAACATTTGATTCAGATTCTCCAACGTA 361770 ||| || ||| || | | ||| | | ||||| ||||||||||||||||||||| || Sbjct 1769 TCAT-CAACTTCTGCATCCTCAAATAATTTTCTAATATTTGATTCAGATTCTCCAACATA 1711 Query 361771 TTTATTAAAAATTTCTGGTCC 361791 ||| || |||||||| ||||| Sbjct 1710 TTTGTTTAAAATTTCCGGTCC 1690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268028210120960