Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2377 111 1e-19 >seq2377 Length=22370 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| | ||||| |||||||||||| | ||| || ||| | Sbjct 110 ATGCAAATTTTTGTTAAAACACTTACCGGAAAAACCATTACCCTTGAAGTTGAACCTAGC 169 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | |||||| || ||| || || ||||| | || || ||| Sbjct 170 GATACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAGGAAGGGATTCCTCCAGACCAA 229 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | |||| ||| |||||||| |||| |||| ||||| || ||||| || Sbjct 230 CAACGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGCAGAAGTTTGAGTGATTATAAT 289 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||| ||||||||||| ||||| | || | ||| || |||| |||| Sbjct 290 ATTCAGAAAGAATCTACTTTGCATTTAGTACTGAGATTGAGAGGTGGAA 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412823889095360