Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq3020 149 8e-31 >seq3020 Length=37895 Score = 149 bits (164), Expect = 8e-31 Identities = 388/584 (66%), Gaps = 11/584 (2%) Strand=Plus/Plus Query 180426 AAGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGATATTGGTG 180485 |||| || || ||||| || || | || ||||||||| | |||| || || Sbjct 24554 AAGAGTTGTTGTGGATTATAGCGGGATGCACCAATTCTAATGTATTAACAAATCGAAATG 24613 Query 180486 TTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTTTC 180545 ||||| | ||| || | ||||| || | | ||||| ||| || ||||| | | Sbjct 24614 TTAAAATTTGGGATCAGAATGGGTCTAGAGAATTTTTGGATAATTTAGGATTCAAAGATA 24673 Query 180546 GAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAAT 180605 ||||| ||||||||||| ||| | ||||||||||||||||| ||| || ||| ||| Sbjct 24674 GAAAAACTGGTGATTTAGGTCCAGTGTATGGATTTCAATGGAGGCATTTCGGTGCTAAAT 24733 Query 180606 ATATTGACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAA-GTTATA 180664 | | |||||| || ||| ||||| | || ||| | || || |||||| Sbjct 24734 ACAAAACATGTGATGATAATTATGATAAACAAGGAGTGGATCAACTG-GCAAATGTTATA 24792 Query 180665 GAAACTATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGGAATG-TATC 180723 | || ||||| | || || || | ||||| | || | ||||| | ||| Sbjct 24793 CATTTAATTAAAAACGACCCGGATAGCAGGAGAATTGTATTATCTTCATGGAACGCTATG 24852 Query 180724 ACAATTACCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAA 180783 | || || |||||||| | || ||||| || ||| | ||||| |||||| | || Sbjct 24853 G-ATTTGCCGGATATGGCGTTACCCCCATGCCATTGTCTCTGTCAATTCTATGTTTGTAA 24911 Query 180784 TAAAATTTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACC 180843 ||| | | ||| || || || || ||| ||||||||||| | ||| | ||||| || Sbjct 24912 TAACA---AGTTATCGTGTCAGTTATACCAACGATCTGCAGATATGGGACTTGGTGTCCC 24968 Query 180844 ATATAATATTGCTTTCTATTCATTTTTGGTATGTGTTCT--CTCAAAGTGGTGCAATTTA 180901 || ||||||||| |||||| |||| | | | || |||| | | | | | | Sbjct 24969 ATTCAATATTGCTAGCTATTCTCTTTTAACTTTTATGCTGGCTCATATTACTAATACTGA 25028 Query 180902 ACCCCTGGAAAATTTATTCACACTTTTGGGGATGTTCATGTATATTCTAACCATATTGAC 180961 ||| ||| |||||||||||||| |||| |||| |||||| ||| ||| ||| |||| Sbjct 25029 ACC--TGGTGAATTTATTCACACTATTGGAGATGCTCATGTTTATGTTAATCATGTTGAA 25086 Query 180962 CAATTAAAAATTCAATTAAGCAGAAACCCTTACAAGTTTCCAAA 181005 | |||||| ||| | || | |||||| ||||||| || Sbjct 25087 CCTTTAAAACAACAAATTGTTCGAGAACCTTACCAGTTTCCTAA 25130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655251167680000