Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2377 91.5 3e-13 >seq2377 Length=22370 Score = 91.5 bits (100), Expect = 3e-13 Identities = 103/140 (74%), Gaps = 11/140 (8%) Strand=Plus/Minus Query 81643 CAGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------ 81696 || |||| |||| ||||| |||||||||||| | | |||| | ||||| || Sbjct 310 CAAAGTAGATTCTTTCTGAATATTATAATCACTCAAACTTCTGCCATCTTCCAATTGTTT 251 Query 81697 -----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGC 81751 |||| |||| | |||||| ||||| | || |||||||||||||||| ||||| Sbjct 250 ACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATCCCTTCCTTATCTTGAATTTTTGC 191 Query 81752 TTTTATATTTTCAATCGTAT 81771 ||||| ||||||||| |||| Sbjct 190 TTTTACATTTTCAATTGTAT 171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903371449907200