Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_025422.1 Length=155997 Score E Sequences producing significant alignments: (Bits) Value seq3020 95.1 1e-14 >seq3020 Length=37895 Score = 95.1 bits (104), Expect = 1e-14 Identities = 131/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 23147 GGTTCTTGAA--AGTTGTTCTTTTGCTCCATCGACATGATTTACATACAAATGAGCATCA 23204 |||||| ||| | ||||| |||| || |||||||| ||||| | ||||||||| Sbjct 25115 GGTTCTCGAACAATTTGTTGTTTTAAAGGTTCAACATGATTAACATAAACATGAGCATCT 25056 Query 23205 ACAATTGTATGGACAAATTCACCAGCTTTTAGTCC-AGTAATCTTTGCAACCATATGAGT 23263 |||| || || | ||||||||||| || ||| |||||| | || | |||| ||| Sbjct 25055 CCAATAGTGTGAATAAATTCACCAGGTTC-AGTATTAGTAATATGAGCCAGCATAAAAGT 24997 Query 23264 CAAAAGAGAATAGAAAGCAATATTGTATGGAATTCCGAGGGCAGTATCTCCAGAACGCTG 23323 |||||||||||| |||||||||| |||| | || || | ||||| |||| || || Sbjct 24996 TAAAAGAGAATAGCTAGCAATATTGAATGGGACACCAAGTCCCATATCTGCAGATCGTTG 24937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499040441254400