Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2377 127 2e-24 >seq2377 Length=22370 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||||||| | || || || ||||||||| | ||| ||||| || Sbjct 110 ATGCAAATTTTTGTTAAAACACTTACCGGAAAAACCATTACCCTTGAAGTTGAACCTAGC 169 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| ||||||| || || ||||| | || || ||| Sbjct 170 GATACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAGGAAGGGATTCCTCCAGACCAA 229 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | |||| ||| || |||||||| |||||| | || | || | ||||| || Sbjct 230 CAACGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGCAGAAGTTTGAGTGATTATAAT 289 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || || ||||||||||| | ||||||||| |||| || |||| ||| Sbjct 290 ATTCAGAAAGAATCTACTTTGCATTTAGTACTGAGATTGAGAGGTGGA 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402312340060160