Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq3020 89.7 5e-13 >seq3020 Length=37895 Score = 89.7 bits (98), Expect = 5e-13 Identities = 119/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 31162 TGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTCTTAG-ATG 31220 ||||| ||||||| ||| ||||| ||||||| ||| | ||||| || ||| | || || Sbjct 25079 TGATTAACATAAACATGAGCATCTCCAATAGTGTGAATAAATTCACCAGGT-TCAGTATT 25021 Query 31221 GGTCAATTTG-GCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAATGGTACAC 31279 || ||| || || | || | | ||||| | ||| || || || |||||||| |||| Sbjct 25020 AGT-AATATGAGCCAGCATAAAAGTTAAAAGAGAATAGCTAGCAATATTGAATGGGACAC 24962 Query 31280 CCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGA 31319 | | ||||| ||| ||||||||||| |||||| ||| || Sbjct 24961 CAAGTCCCATATCTGCAGATCGTTGGTATAACTGACACGA 24922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512995027225600