Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1444 315 2e-80 seq1980 242 1e-58 seq2377 214 5e-50 seq780 178 4e-39 seq445 147 7e-30 seq1640 132 1e-25 seq2489 118 3e-21 seq1290 113 1e-19 seq1952 104 7e-17 seq1811 93.3 1e-13 seq2932 89.7 2e-12 seq1453 84.2 7e-11 >seq1444 Length=49888 Score = 315 bits (348), Expect = 2e-80 Identities = 599/877 (68%), Gaps = 4/877 (0%) Strand=Plus/Plus Query 182917 TAACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTC 182976 |||| || ||||||||||||| ||| | |||||||| ||||| | | || | |||| Sbjct 45444 TAACCTTCAAAATACCATTAGCGTCCATATCAAATGTGACTTCTACTTTGGGTCCGCCTC 45503 Query 182977 GTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTC 183036 ||| || || || ||||||||| ||||| |||||| || ||| ||||| | Sbjct 45504 TTGGACCCGGAGGGATACCAGTTAAATCAAATTTTCCTAATAAATGATTGTCTTTTGACA 45563 Query 183037 TTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAG 183096 | || || |||||||| | || ||| | |||||| || || ||||| || || | Sbjct 45564 ACGGCCTTTCTCCTTCATAAATTTCAATTGAAACTGCAGGTTGGTTATCGGCGTACGTCG 45623 Query 183097 AAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTA 183156 ||| ||| | || || | |||||||| | ||| || || |||| |||||||| Sbjct 45624 TAAACGACTGCATCTTTTTGGTGGGAATAGTGGTATTACGTTCAATAATTTTAGTCATTA 45683 Query 183157 CTTCTCTGGCAGTTTCTAATCCTAAT-GATAATGGTGCTACATCTAGTAATAATAAATCT 183215 | | | |||| |||| | || ||||| || ||||| || ||||| ||||||||| Sbjct 45684 CAGAGCCTGAAGTTG-TAATGCCCATCGATAAAGGAGCTACGTCAAGTAACAATAAATCT 45742 Query 183216 -GATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGC 183274 || |||| || || | || | ||| ||||||||||| || |||||||| || Sbjct 45743 TGAACTTTT-TCACTTTGATCGCCAGCCATAATCGCAGCTTGAACTGCCGCACCATACGC 45801 Query 183275 AACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAG 183334 || ||||| ||||| ||||| | || ||||| ||| |||||||| |||| ||||| Sbjct 45802 GACGGCTTCGTCTGGATTAATGCTATGATTTAATTTTTTACCATTAAAGAATTTAGAAAG 45861 Query 183335 CATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATT 183394 || ||||||||||||||||| ||| |||||||| || | || | || | || | Sbjct 45862 CAAACTTTGAATTTTTGGAATTCGAGTAGAACCACCAACAAGAACAATATCGTGTATTTG 45921 Query 183395 ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAA 183454 ||||||| || | |||||| || |||| || || ||||| | || | | || Sbjct 45922 ACTTTTATCAAATCCTGAATCACGCAATGCTTTGTCGACCGGGTCGAGTGTGCTGGTGAA 45981 Query 183455 TAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACC 183514 || ||| | ||||| ||||| ||||| ||| ||| | | | | |||| ||||| Sbjct 45982 TATATCATTGCATAAATCTTCCAATCTAGCTTGAGTCATGGTAGTCTGATAGTCGATACC 46041 Query 183515 ATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGC 183574 || | | | || || || | || ||||| | || ||||| ||| ||| || Sbjct 46042 ATCAAACACTGAGTCTATGTTGATTATAGTTTGCGATTCAGAGGATAAATTTCGTTTGGC 46101 Query 183575 TCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCTTGTTT 183634 ||||| ||| | ||| | | ||||| | | |||| ||| | |||||||||| || Sbjct 46102 ACGTTCGCATTCAGTTTTCAAACGACGCATAGCTCTTCTATTTCCAGTAATATCTTTCTT 46161 Query 183635 ATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACC 183694 ||||| ||| ||| || | | || || | |||||| |||| |||||||| Sbjct 46162 GTGTTTCTTTTGAAAATCTTGGACGCAGTGCTGCACTAATCTCTCGTCAATGTCTTCACC 46221 Query 183695 ACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAA 183754 || ||||| || || ||||| || | ||| |||||| ||| || | ||||| | || Sbjct 46222 TCCCAAATGAGTGTCTCCAGCCGTTGATTTTACTTCATATACACCTCCGACAATAGTCAA 46281 Query 183755 AATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 ||| || ||||||||||| ||||| |||| |||||| Sbjct 46282 AATAGAAACATCAAATGTGCCACCTCCCATGTCAAAA 46318 Score = 250 bits (276), Expect = 8e-61 Identities = 958/1490 (64%), Gaps = 47/1490 (3%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || ||||||||||| || || || || |||||||| ||||| || | ||| | || || Sbjct 46911 GCAATAGGAATCGACTTGGGAACAACATATTCTTGCGTTGCAGTATATCAACACAATAGT 46852 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| | ||||| ||| |||| ||||| || ||| ||||| || || Sbjct 46851 GTCGAAATTTTGGCAAACGATGTTGGTACAAGAACGACACCAAGTTACGTGAGTTTCACT 46792 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||| | | ||||| || |||| || || || ||||| ||||| || |||| Sbjct 46791 GACGTTGAAAGATTAATTGGAGACGCTGCCAAGAACCAGGCTGCATCTAATACAGCAAAT 46732 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || ||| |||| || || | |||||| ||| || | ||| || ||| Sbjct 46731 ACAATTTACGATGTAAAAAGATTAATTGGTCGAAATTATAGCGACCTTACTGTTCAACAG 46672 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAA--AGACGGT---GATAAACCAATTA 349493 ||| | ||| || | | | | | | |||| |||||| |||||||| | Sbjct 46671 GATGTTAAAAATATGACGTATGATAT-----CAAACCAGACGGAAAAGATAAACCGCAAA 46617 Query 349494 TTGAGGTTGAAT-ATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 || | |||| | | ||| ||| ||||| ||||| || ||||||||||| |||| Sbjct 46616 TTT-GTTTGACTTACAAAAACGAAAAAAAAAGATTTTACCCTGAAGAAATTTCTGGAATG 46558 Query 349553 GT-------TTTA--GTTAAAATG--AAGGAAATT-------GCTGAAGCATATTTAGGT 349594 || |||| || |||| | || ||||| ||| |||| | | Sbjct 46557 GTACTATCTTTTATGGTCAAAACGGCAAAAAAATTTTTTGGTGCTCCAGCAGAC---GAC 46501 Query 349595 GAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCT 349654 | || || | || || | || || ||||||||||| ||||||| || | Sbjct 46500 AATACGAAAATTTCCGCAGTGGTCACAGTTCCAGCCTATTTCAATGATGGTCAAAGACAA 46441 Query 349655 GCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCC 349714 || ||||||||||| | ||||| || | |||||| | || || | || ||||| Sbjct 46440 GCTACAAAAGATGCATGTGCTATTGCTGGTATTAATGTTTTGAGGATTTTGAACGAACCA 46381 Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || ||||| || | || |||||| | || ||||| | ||| |||| | | | || | Sbjct 46380 ACGGCTGCTGCTCTAGCGTATGGGTTGGACAAAATTGGCGACGAAGATAGACACGTTTTA 46321 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 |||||||| | || ||||| || |||||||| || | | || ||| | || | Sbjct 46320 ATTTTTGACATGGGAGGTGGCACATTTGATGTTTCTATTTTGACTATTGTCGGAGGTGTA 46261 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894 | |||||| ||| |||| ||||| || || ||| | || || ||||| |||| | | Sbjct 46260 TATGAAGTAAAATCAACGGCTGGAGACACTCATTTGGGAGGTGAAGACATTGACGAGAGA 46201 Query 349895 CTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAAT 349954 | || ||| | || |||| ||| | || || | |||||| | ||| Sbjct 46200 TTAGTGCAGCACTGCGTCCAAGATTTTCAAAAGAAACACAAGAAAGATATTACTGGAAAT 46141 Query 349955 CCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCT 350014 ||||| |||||||| | | ||||| || |||||||| || || ||||| ||| Sbjct 46140 AGAAGAGCTATGCGTCGTTTGAAAACTGAATGCGAACGTGCCAAACGAAATTTATCCTCT 46081 Query 350015 ACTACCCAAACCTCTATTGAA-ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATC 350073 | ||||| | || | || || || || | |||||| | || | | | Sbjct 46080 GAATCGCAAAC-TATAATCAACATAGACTCAGTGTTTGATGGTATCGACTATCAGACTAC 46022 Query 350074 TATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAG-AGCAACAATGGATC 350132 || || | ||| | || ||||| ||||| | ||| | || | |||| || | || | Sbjct 46021 CATGACTCAAGCTAGATTGGAAGATTTATGCAATGATATATTCACCAGCA-CACTCGACC 45963 Query 350133 CTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTT 350192 | || || |||| ||| ||| || | | |||| ||| || | || | ||| Sbjct 45962 CGGTCGACAAAGCATTGCGTGATTCAGGATTTGATAAAAGTCAAATACACGATATTGTTC 45903 Query 350193 TAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATG 350252 | |||||||||||||| || ||||||||| ||||| || || ||| | || ||||||| Sbjct 45902 TTGTTGGTGGTTCTACTCGAATTCCAAAAATTCAAAGTTTGCTTTCTAAATTCTTTAATG 45843 Query 350253 GCAAAGAACCTTCTAGATCA----ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCT 350308 | ||| || || |||| ||||||||||| ||||| || || |||||||| || Sbjct 45842 GTAAAAAAT----TAAATCATAGCATTAATCCAGACGAAGCCGTCGCGTATGGTGCGGCA 45787 Query 350309 GTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTA 350368 ||||| || | ||| | |||| || | ||| ||| || | ||| |||| |||| Sbjct 45786 GTTCAAGCTGCGATTATGGCTGGCGATCAAAGTGAAAAAGTTCAAGATTTATTGTTACTT 45727 Query 350369 GATGTAACTCCACTTTCGCTTGG-ATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTAT 350427 || ||| |||| | ||| | || |||| || |||| || ||||||||| |||| Sbjct 45726 GACGTAGCTCCTTTATCGATGGGCATTACAA-CTTCAGGCTCTGTAATGACTAAAATTAT 45668 Query 350428 TCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAA 350487 | | |||| ||| | || || |||||| || | ||| | || | || ||||| Sbjct 45667 TGAACGTAATACCACTATTCCCACCAAAAAGATGCAGTCGTTTACGACGTACGCCGATAA 45608 Query 350488 TCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAA 350547 || || || || ||||| || | | |||||| ||| | | | ||||| ||| | Sbjct 45607 CCAACCTGCAGTTTCAATTGAAATTTATGAAGGAGAAAGGCCGTTGTCAAAAGACAATCA 45548 Query 350548 TAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGAT 350607 | | | ||| ||||| ||| || || || || || ||||| | || | | Sbjct 45547 TTTATTAGGAAAATTTGATTTAACTGGTATCCCTCCGGGTCCAAGAGGCGGACCCAAAGT 45488 Query 350608 TGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAG 350657 |||||| | || ||||| || | ||||||||||| || ||||| |||| Sbjct 45487 AGAAGTCACATTTGATATGGACGCTAATGGTATTTTGAAGGTTACGGCAG 45438 >seq1980 Length=651 Score = 242 bits (268), Expect = 1e-58 Identities = 425/613 (69%), Gaps = 13/613 (2%) Strand=Plus/Plus Query 182794 CATCTTCTTTAGCATACTTTTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAA 182853 |||||||||| || |||||| ||| || | ||||||||| |||||| || |||| Sbjct 11 CATCTTCTTTTTCAAACTTTTTAGCTTCATTAACCATTCTTTCAATTTCAGATTGGGAAA 70 Query 182854 GATGACCTGCATCATTTGTAATTACTACATTACTAGTTACTCCAGTTGATTT--TTCAAG 182911 | | |||| ||||||| |||| | | | || |||| ||| || | Sbjct 71 CTTT---TTTATCACTTGTAATAGTAACATCAGTCTTAAC----GTTGTTTTCTTTGCAT 123 Query 182912 TGCGC--TAACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGA 182969 | || ||| || | |||||| |||| |||| |||||| | |||||||| || ||| Sbjct 124 TCAGCAGTAATTTTCATAATACCGTTAGCATCAATATCAAAGGTAACTTCAATTTGAGGA 183 Query 182970 ACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCT 183029 ||||||||||| ||||| ||||| ||||| ||| ||| || | ||| ||| Sbjct 184 ACACCTCGTGGTGCAGGTGGTATTCCGGTTAAGTCAAAACGACCCAACAAGTGATTGTCT 243 Query 183030 TTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTA 183089 ||||| ||| || || ||||| || | ||||||||||||||| | |||||||| | Sbjct 244 TTAGTCATTGGTCGTTCTCCTTCGTAAATTTGAATAGTAACTGCAGTTTGATTATCTGCA 303 Query 183090 TAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACA 183149 || || || || | ||| | ||| || ||||||| || |||||| |||||| | Sbjct 304 TACGTTGAGAATATTTGTTGTTTTTTTGTAGGAATTGTACAATTTCTTTCTACAATTTTA 363 Query 183150 GTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAAT 183209 | ||| || || | || || | ||| || |||| |||| ||||| | |||||| Sbjct 364 GACATGACATCACCAGCTGTGCAGATTCCCAAAGATAGAGGTGTAACATCCAACAATAAT 423 Query 183210 AAATC-TGATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACC 183268 | ||| ||| ||| || || | |||| | |||||| ||||||||||| ||||| Sbjct 424 AGATCTTGAACCTTT-TCACTTTGGTCACCACTCATAATTGCGGCTTGAACAGCGGCACC 482 Query 183269 ATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTC 183328 ||| || ||||||||||| || || || || |||| ||| |||||||| || || Sbjct 483 ATAAGCTACAGCTTCATCAGGATTGATGCTGTGATTCAATTTTTTACCATTAAAGAAATC 542 Query 183329 TGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATC 183388 ||| | || || ||||||||| || |||||||| || ||||| || || || || |||| Sbjct 543 TGACAACAATTTTTGAATTTTAGGGATTCTAGTAGATCCACCAACCAAAACAACATCATG 602 Query 183389 GATATTACTTTTA 183401 || | |||||| Sbjct 603 AATTTGGCTTTTA 615 Score = 167 bits (184), Expect = 7e-36 Identities = 332/490 (68%), Gaps = 4/490 (1%) Strand=Plus/Minus Query 350168 AAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAA 350227 |||| || ||| |||| || ||||| |||||||| ||||| | || || ||| ||||| Sbjct 614 AAAAGCCAAATTCATGATGTTGTTTTGGTTGGTGGATCTACTAGAATCCCTAAAATTCAA 555 Query 350228 CAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA--ATTAATCCAGATG 350285 | || | || || || |||||||| ||| || || | || || ||||| |||| Sbjct 554 AAATTGTTGTCAGATTTCTTTAATGGTAAAAAA--TTGAATCACAGCATCAATCCTGATG 497 Query 350286 AAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTA 350345 ||||||| || |||||||| |||||||| || | ||| | ||| | | ||| | Sbjct 496 AAGCTGTAGCTTATGGTGCCGCTGTTCAAGCCGCAATTATGAGTGGTGACCAAAGTGAAA 437 Query 350346 AAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTG 350405 | || | ||||||||| | | ||||| || || || || | ||| | || ||| Sbjct 436 AGGTTCAAGATCTATTATTGTTGGATGTTACACCTCTATCTTTGGGAATCTGCACAGCTG 377 Query 350406 GTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAA 350465 |||| || ||| || || | |||||| |||| | ||||||||||| |||| Sbjct 376 GTGATGTCATGTCTAAAATTGTAGAAAGAAATTGTACAATTCCTACAAAAAAACAACAAA 317 Query 350466 CTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAAC 350525 || || || | |||||||||||| | || || || |||||| | | ||||| |||| Sbjct 316 TATTCTCAACGTATGCAGATAATCAAACTGCAGTTACTATTCAAATTTACGAAGGAGAAC 257 Query 350526 GTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAA 350585 | | |||||||| ||| | | || ||| | ||| | ||| ||||| Sbjct 256 GACCAATGACTAAAGACAATCACTTGTTGGGTCGTTTTGACTTAACCGGAATACCACCTG 197 Query 350586 TGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAA 350645 || |||| |||||||| |||||||| | || ||||||||| | || |||||| | | Sbjct 196 CACCACGAGGTGTTCCTCAAATTGAAGTTACCTTTGATATTGATGCTAACGGTATTATGA 137 Query 350646 ATGTTACCGC 350655 | |||| || Sbjct 136 AAATTACTGC 127 >seq2377 Length=22370 Score = 214 bits (236), Expect = 5e-50 Identities = 186/231 (81%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| | ||||| || || | ||| | |||||| ||||| |||||||||||||| Sbjct 340 CATTCCACCTCTCAATCTCAGTACTAAATGCAAAGTAGATTCTTTCTGAATATTATAATC 281 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || ||| |||||||| | |||||| |||||||| |||| |||||| || || || Sbjct 280 ACTCAAACTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGG 221 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| ||||| |||||||| ||||||||||| ||||| | ||| ||||| Sbjct 220 AGGAATCCCTTCCTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTATCGCTAGGTTC 161 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| |||| || |||||||| |||||||| |||||||| ||||| Sbjct 160 AACTTCAAGGGTAATGGTTTTTCCGGTAAGTGTTTTAACAAAAATTTGCAT 110 Score = 95.1 bits (104), Expect = 4e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | ||| | || | |||||| || || ||||||||||| |||| Sbjct 116 TTTGCATACCACCTCGAAGTCTCAAGACTAAATGAAGTGTGGATTCTTTTTGAATGTTAT 57 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTG 140617 | ||| ||| ||| |||||||| | |||||| |||||||| |||| |||||| Sbjct 56 AGTCACTTAAACTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATTAAACGTTG 2 >seq780 Length=27146 Score = 178 bits (196), Expect = 4e-39 Identities = 339/496 (68%), Gaps = 4/496 (1%) Strand=Plus/Minus Query 67775 ATAAAGAATT--TATCCATTTCTCAACATACGATAATGAACGTTCTATTCCAAATTTAAT 67832 |||||||||| ||| ||| ||| || || |||||| | || || || ||| | Sbjct 13941 ATAAAGAATTGGTATTG-TTTAGCAATATG-GACAATGAAAGATCAATCCCTTCTTTGGT 13884 Query 67833 TGATGGTTTTAAAATTAGTTTAAGAAAAATTATCTATTCGGCATTTAAGAAACGTCTAAC 67892 |||||| ||||| | || |||||| |||| || | || || | | | | | Sbjct 13883 TGATGGGTTTAAGCCTGGTCAGAGAAAAGTTATGTACACTTGTTTCAAAAGAAATTTGAT 13824 Query 67893 TAGTGAAATTAAAGTTGCACAATTTAGTGGTTATGTTTCAGAACATTCAGGCTATCATCA 67952 | ||| | |||||||||||||| ||||| |||| | ||| || | |||||||| Sbjct 13823 AAAAGAATTAAAAGTTGCACAATTATCTGGTTCTGTTGCTGAATTATCGGCATATCATCA 13764 Query 67953 CGGTGAAGCTAGTTTAAATTCATCAATTGTAGGTTTAGCTCAGAATTTTGTTGGATCAAA 68012 ||| |||| ||||| | | ||||| || ||| ||||| |||| ||||| || Sbjct 13763 CGGCGAAGTAAGTTTGATGGCCACAATTATAAATTTGGCTCATGATTTCGTTGGCAGTAA 13704 Query 68013 TAATATTAATTTACTAGAACCAAAAGGTCAATTTGGAACTAGATTACTTGGAGGAAAAGA 68072 |||||||||| || || ||||| ||||||||||| ||| ||||| |||||||||||| Sbjct 13703 TAATATTAATCTATTAATGCCAAATGGTCAATTTGGTACTCGATTAGCTGGAGGAAAAGA 13644 Query 68073 TGCTGCATCTGAAAGATATATATTTACACATCTAAATACTTTAACTAGACTTATCTTTAG 68132 ||| || | ||||||| || || ||| ||| | | ||| | || ||||| Sbjct 13643 TGCAGCTAGTCCTCGATATATTTTCACTTGTCTCAATGCCATTACTCGTAAAATTTTTAG 13584 Query 68133 ACAAGAAGATGATAATATTCTTGAATATTTAGAAGATGATGGTGATAAAGTTGAGCCAAT 68192 || |||||||||| ||||||| ||| | || ||| | |||| || || | Sbjct 13583 ACCTGAAGATGATAGTATTCTTAGTTATACGTATGACGATACTTTTAAAACAGAACCCAA 13524 Query 68193 CTATTATGTTCCTATTATTCCTATGATTTTAGTAAATGGTTCAAAAGGGATTGGCACTGG 68252 || ||||| || ||| | || |||||||| || ||||||| |||| ||||| ||||| Sbjct 13523 ATACTATGTCCCCATTTTACCCATGATTTTGGTTAATGGTTGTGAAGGTATTGGAACTGG 13464 Query 68253 ATTTAGTACAGATATT 68268 | || ||| | ||| Sbjct 13463 GTGGAGCACAAAAATT 13448 >seq445 Length=13936 Score = 147 bits (162), Expect = 7e-30 Identities = 288/418 (69%), Gaps = 11/418 (3%) Strand=Plus/Minus Query 378105 TTCAACTCTTACTGGATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTT 378164 ||||||| || || | || ||||| ||||||||| ||||||| | | ||| | Sbjct 6662 TTCAACTTTTTCTCCAGTTAAACCATCTTCTCCATATCGAAATTGAATTAAATGATCCAT 6603 Query 378165 ATTGTTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCG 378224 | | || || || |||||| |||| | ||| | ||||| || | || Sbjct 6602 TTGATCTCGCACTGTTGCGTCATATTTAACTGCCACCGATTCCATCGCTTTTATTAATCT 6543 Query 378225 TCGAGAAATATAACCAGTTT-GACTAGTTTTAACTGCAGTATCAATTAAACCAACACGAC 378283 || ||| || ||||||| | || ||||| ||||| || ||||||||||| | | || Sbjct 6542 ACGTTGAATGTATCCAGTTTCGGCT-GTTTTTACTGCTGTGTCAATTAAACCTTCTCTAC 6484 Query 378284 CACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAA 378343 ||||||| || ||||| || ||||| || || || | |||| | | | | ||| | |||| Sbjct 6483 CACCCATAGCGTGGAAAAAAAATTCGGTGGGCGTCAATCCAGCTAAATAAGAATTTTCAA 6424 Query 378344 TAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCT 378403 ||| ||||| | | || | ||| | ||| || ||||||| ||||| | |||| Sbjct 6423 CAAAACCTCTAGATTCAGGGCCGTAATCGTGTTTAATAAAATGAGGCAATGTTCT-TTCT 6365 Query 378404 C-AAACCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAA---GTGCAGAAACC 378459 | ||| ||| |||||||||||||||| || |||||||||||||||| |||| ||| Sbjct 6364 CTAAAACCAAATGGAATTCGTTTTCCTTCTACATTCTGTTGACCAACACATGCAATAAC- 6306 Query 378460 ATTTGAGCAATATTTAAATCACTACCTTTAGACCCAGCATTAACCATA-ATTACAAAT 378516 ||||| |||||| | | | || || || |||||| |||||| ||| |||| Sbjct 6305 --TTGAGAAATATTAATTTTAGACCCCTTTGAACCAGCAACCACCATAGATTTGAAAT 6250 Score = 98.7 bits (108), Expect = 3e-15 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 379257 TTGAGGCATATGAAGATTCATTTCATCACCATCAAAATCAGCATTATATGGCTTAGTATC 379316 |||||| | ||||||||||||||| |||||||||||||||||||||||||| | || | Sbjct 5477 TTGAGGTAAATGAAGATTCATTTCGTCACCATCAAAATCAGCATTATATGGTGTTGTTAC 5418 Query 379317 TCCTACATTCATTCTAAAAGTATCACCTTGATATAAAATTTTAACAATATGACACATCAT 379376 | || ||| | | ||||||| ||| | ||| | ||| || | || |||||||| Sbjct 5417 ACTTAAATTTAAACGAAAAGTA-GACCACG--GTAATACTTTTACTCTGTGGCACATCAT 5361 Query 379377 TGATAATCTATGAAGTGTAGGCTGACGATTAAA 379409 | | |||||||||||||||| | ||| || Sbjct 5360 ACTCATTTTATGAAGTGTAGGCTGTCTATTGAA 5328 >seq1640 Length=44113 Score = 132 bits (146), Expect = 1e-25 Identities = 111/136 (82%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 140603 AAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTAC 140662 ||| |||| |||||| ||||| ||||||||||| |||||||| |||||||| || || || Sbjct 44113 AAAAATTAAACGTTGTTGATCTGGAGGAATTCCCTCTTTATCTTGAATTTTCGCCTTAAC 44054 Query 140663 ATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTT 140722 ||| ||||| | |||| || ||||||||||| |||| |||||||| |||| ||||| Sbjct 44053 ATTTTCAATAGTATCACTAGGCTCAACTTCAAGAGTAATAGTCTTTCCAGTTAAAGTTTT 43994 Query 140723 TACAAAAATCTGCATT 140738 ||||| || |||||| Sbjct 43993 AACAAATATTTGCATT 43978 >seq2489 Length=37580 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 ||||| | |||||||||||| | ||| || | || |||||||| ||| ||||| || Sbjct 23141 TGGTCTACATATCGAGCTGTGGCGTCAAAAACTCGTAACATAGGAACAATTCCATTTGAT 23082 Query 206509 GTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATGTAATCCA 206568 |||||||| |||||| | |||| ||| || | || |||| |||||||| | ||| Sbjct 23081 GTTCCATTCGTTCCTTTTATATAACTACCCTTGGATCGAATACAATGTATATTAACTCCG 23022 Query 206569 ATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCATCA 206628 ||||| || || | || ||||| ||| |||| | ||||||||| |||||||| ||| Sbjct 23021 ATTCCACCAGCACTCTTGGAAATTAGAGCGCATTGTCTTAATGTATCGTAAATTCCTTCA 22962 Query 206629 ACACTATCACTTTCCATAGCAATTAAAAAACAA 206661 | || ||| | ||||| || | ||| ||| Sbjct 22961 ATGCTGTCATCCTTCATAGTAAGAAGAAAGCAA 22929 Score = 102 bits (112), Expect = 2e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 204909 ACATAAATTACTAGACTTAATAGTACCAAGGTTTTGTTGATTTGTTTTATAATTAACAGC 204968 ||||| |||||| |||| ||||| |||| |||||| ||||||| |||| ||| || Sbjct 24474 ACATAGATTACTGCACTTTATAGTTCCAACGTTTTGCTGATTTGATTTACTATTGCATGC 24415 Query 204969 ATCTTTATATAACATATATGGTGTACCTGTTTCCATTTGCGAATCTAAAATTTTGATCCA 205028 ||| ||||| |||||||||||| ||||||||| ||||| |||| || ||| | ||| Sbjct 24414 ATCCTTATACAACATATATGGTACACCTGTTTCAATTTGTGAATTTATAATAGCGTGCCA 24355 Query 205029 TAAA 205032 |||| Sbjct 24354 TAAA 24351 >seq1290 Length=30651 Score = 113 bits (124), Expect = 1e-19 Identities = 216/323 (67%), Gaps = 33/323 (10%) Strand=Plus/Minus Query 349599 CAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAA 349658 |||||| | |||| |||||||||||||| || |||||||| ||| | || | || | Sbjct 18350 CAGTAAATAATGCAGTTATTACTGTACCCGCTTATTTTAACGATTCTCAAAGGCAAGCTA 18291 Query 349659 CAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTG 349718 ||||||||||||| | ||||| || || |||||| | ||| | || ||||| || |||| Sbjct 18290 CAAAAGATGCTGGAAAAATTGCTGGTTTGAATGTTTTGAGAGTAATAAATGAGCCAACTG 18231 Query 349719 CTGCAGCAATTGCATATGGGCTTGAT------------AAAATGAGTGACCAAGaaaaaa 349766 |||| || | || |||||| | ||| |||||| || | | || || Sbjct 18230 CTGCCGCTCTCGCTTATGGGTTAGATAAGGCCGAAGACAAAATGTTTG-CTATTTAATAA 18172 Query 349767 aT-----------ATTCTTA---------TTTTTGATTTAGGTGGTGGTACTTTTGATGT 349806 | ||| ||| ||| ||||| ||||| ||||| || || || Sbjct 18171 TTTTATTTATTGCATTATTAGAGTTGCCGTTTACGATTTGGGTGGAGGTACATTCGACGT 18112 Query 349807 ATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACA 349866 || || || | || |||| |||||||||||||| |||| ||| ||||| Sbjct 18111 TTCGATATTAGAGATACAAAAGGGTGTTTTTGAAGTTAAATCAACAAATGGAGATACCTC 18052 Query 349867 TCTTGGTGGAGAAGATTTTGATA 349889 ||||||||| |||||||| |||| Sbjct 18051 TCTTGGTGGTGAAGATTTCGATA 18029 Score = 107 bits (118), Expect = 6e-18 Identities = 113/147 (77%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 266270 TTATACTCATTGTGAAATTCATCCAAGTACAT--TATTAGGTATTTTAGCATCTTGTATT 266327 ||||||||||||||||||||| || || || |||| || | | || ||| |||| Sbjct 14068 TTATACTCATTGTGAAATTCACCC--GTCAATGATATTGGGAGTATGTGCTTCTATTATT 14125 Query 266328 CCATTTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAACAG 266387 || || ||||| || |||||| | || ||| |||||||||| ||| ||||||||||| Sbjct 14126 CCTTTCCCAGATCACAATCAATCTCCACGTAATACATATCAATCTGCCATGGGTAAACAA 14185 Query 266388 GCTATGGGTATCTATGTTACAAATTTT 266414 |||||||| || ||| ||| |||||| Sbjct 14186 GCTATGGGAATTTATTGTACCAATTTT 14212 Score = 87.8 bits (96), Expect = 5e-12 Identities = 109/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Plus Query 183643 TTTTAAATTCAGTAATAAAATGTTG---AAGTAATCTTGTATCAAAATCTTCACCACCTA 183699 |||||||||| |||| |||| || || |||||| ||| |||||||||||||| | Sbjct 17993 TTTTAAATTCTTTAATTAAATATTCCACAATTAATCT---ATCGAAATCTTCACCACCAA 18049 Query 183700 AATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTG 183759 | ||||| ||| || | |||||||||||| | || | || || | ||| || | Sbjct 18050 GAGAGGTATCTCCATTTGTTGATTTAACTTCAAAAACACCCTTTTGTATCTCTAATATCG 18109 Query 183760 ATACATCAAATGTACCACCACCCAAATC 183787 | || || |||||||| ||||||||||| Sbjct 18110 AAACGTCGAATGTACCTCCACCCAAATC 18137 >seq1952 Length=33364 Score = 104 bits (114), Expect = 7e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || |||||||||||||| ||||| ||||| ||||| ||||| | ||| || ||||||||| Sbjct 32348 ATACCTTCTTTATCCTGTATTTTCGCTTTAACATTTTCAATGGTATCCGACGGTTCAACT 32407 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || | |||| || ||||| |||| ||||| |||||||| ||||| Sbjct 32408 TCCAAAGTAATAGTTTTTCCCGTTAAGGTTTTAACAAAAATTTGCAT 32454 >seq1811 Length=36824 Score = 93.3 bits (102), Expect = 1e-13 Identities = 108/142 (76%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTC-AACAGTTACT 350235 ||||||||||| ||||| || || |||||||| |||||||| ||||| | || | || | Sbjct 8555 ATTGATGAAGTCGTTTTGGTAGGAGGTTCTACTCGTATTCCTAAAGTCCGAAAACTTGTT 8496 Query 350236 -ATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTG 350294 | | | ||||| ||||| || ||||| | || ||| || || |||||||| ||| Sbjct 8495 CAAC--AATTTTTGAATGGAAAGGAACCAGCCAGTGGAATCAACCCCGATGAAGCCATTG 8438 Query 350295 CATATGGTGCTGCTGTTCAGGC 350316 ||||||| ||||| ||||| || Sbjct 8437 CATATGGAGCTGCAGTTCAAGC 8416 Score = 91.5 bits (100), Expect = 4e-13 Identities = 234/366 (64%), Gaps = 43/366 (12%) Strand=Plus/Minus Query 349565 ATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTA 349624 ||||| || ||| |||| ||| | | |||| ||||| |||||| | ||||| Sbjct 9238 ATGAAAACAACTGCCGAAGGATACCTTAATCAAACCATAACTTGCGCTGTTGTAACTGTT 9179 Query 349625 CCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGG 349684 ||||| || ||||||||||| || ||| || |||||||| || || | ||||| || Sbjct 9178 CCAGCATACTTTAATGATGCTCAACGTCAAGCTACAAAAGACGCAGGTAAAATTGCTGGA 9119 Query 349685 TTAAATGTTCTAAGAATGATTAATGAACCC------------------------------ 349714 ||||||| ||||| || || ||||| Sbjct 9118 CTAAATGTCAAGAGAATTATCAACGAACCGTAATATTTTAATTTTATAAAATTAATATTA 9059 Query 349715 -------ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaa 349767 || ||||| || ||||| ||||| | || |||| |||| |||||||| Sbjct 9058 AATTAGTACCGCTGCCGCCATTGCTTATGGATTGGACAAAAC---TGAC---GAAAAAAA 9005 Query 349768 TATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGA 349827 || | ||| ||||| || |||||||| ||||| || | | || || |||| | Sbjct 9004 CGTTTTGGTTTACGATTTGGGAGGTGGTACATTTGACGTTACTTTGCTTACCATTGACAA 8945 Query 349828 GGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||| | |||||||| ||||| ||| ||||| ||| | ||||||||||||||||| Sbjct 8944 TGGAGTATTTGAAGTATTGGCAACCAATGGAGATACTCATTTAGGTGGAGAAGATTTTGA 8885 Query 349888 TAATCG 349893 ||| || Sbjct 8884 TAACCG 8879 >seq2932 Length=43099 Score = 89.7 bits (98), Expect = 2e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 396508 AAATATAACTGTTTTAGTAGGCATATTAATACCAACTGCAAAGGTTTCTGTTGCAAATAG 396567 ||||| ||| ||| || |||||||||| ||| | |||||| |||||||| ||||| || Sbjct 24662 AAATAAAACGGTTCGAGCCGGCATATTAACACCCATTGCAAACGTTTCTGTGGCAAAAAG 24721 Query 396568 TAATTTAATATAACGTTTTTCAAATAGGAGTTCAACCATTTCTCGTAAAATAGGCATTAT 396627 ||||| | | || ||| || | ||| || ||||| ||||||||||| || Sbjct 24722 AGCTTTAACTAATCCTTCCGAAAAAAGTATTTCCACAGTTTCTTTTAAAATAGGCAATAA 24781 Query 396628 ACCTGCATGATGAATTGCAATTCC 396651 ||| | ||| |||||| ||||||| Sbjct 24782 ACCCGAATGGTGAATTCCAATTCC 24805 >seq1453 Length=11084 Score = 84.2 bits (92), Expect = 7e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 424178 TGCCCCTGTGGCGTAATTGGATAGCGCACCAGACTTCTAATCTGGGGGTTGCGAGTTCGA 424237 || || ||||||||||| |||||||||| | ||||||||||| |||||||||| |||||| Sbjct 7931 TGTCCTTGTGGCGTAAT-GGATAGCGCATCGGACTTCTAATCCGGGGGTTGCGGGTTCGA 7873 Query 424238 ATCTCGCCAGGGGTTTTT 424255 || || ||||| |||| Sbjct 7872 GTCCCGTCAGGGACTTTT 7855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515186062026560