Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq780 118 5e-22 >seq780 Length=27146 Score = 118 bits (130), Expect = 5e-22 Identities = 141/190 (74%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 65077 TCCAGTTCGTCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACC 65136 ||||| | ||| || ||||| ||||||||||||||||||| ||||||||| || || Sbjct 13652 TCCAGCTAATCGAGTACCAAATTGACCATTTGGCATTAATAGATTAATATTATTACTGCC 13711 Query 65137 AATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATA 65196 || |||| ||||||| ||||||| || | ||||| |||| ||||||||||| Sbjct 13712 AACGAAATCATGAGCCAAATTTATAATTGTGGCCATCAAACTTACTTCGCCGTGATGATA 13771 Query 65197 TCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAA-T 65255 | | || ||||| ||| | ||| ||||| |||||||||| ||| || | ||| | Sbjct 13772 TGCCGATAATTCAGCAACAGAACCAGATAATTGTGCAACTTTTAATTCTTTTATCAAATT 13831 Query 65256 TCTTTTTAAA 65265 |||||| ||| Sbjct 13832 TCTTTTGAAA 13841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235669889328000