Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2377 102 2e-16 >seq2377 Length=22370 Score = 102 bits (112), Expect = 2e-16 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTC 210957 ||| || || | || | ||| || ||||| || || |||||||| | ||| || | | Sbjct 325 TCTCAGTACTAAATGCAAAGTAGATTCTTTCTGAATATTATAATCACTCAAACTTC-TGC 267 Query 210958 CATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCT 211017 ||||||||| || || || || || || | ||||||||||| ||||||| ||||||| Sbjct 266 CATCTTCCAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATCCCTTCCT 207 Query 211018 TGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAG 211074 | || || || ||| ||| || ||||| || || || ||| |||||| || || | Sbjct 206 TATCTTGAATTTTTGCTTTTACATTTTCAATTGTATC---GCTAGGTTCAACTTCAAGGG 150 Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| || || || || ||||| | ||||| Sbjct 149 TAATGGTTTTTCCGGTAAGTGTTTTAACAAAAATTTGCAT 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159099722244800