Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2377 84.2 5e-11 >seq2377 Length=22370 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | ||| | |||||| ||||| || || || ||||| ||| |||| || Sbjct 325 TCTCAGTACTAAATGCAAAGTAGATTCTTTCTGAATATTATAATCACTCAAACTTCTGCC 266 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | ||| || || || || | | || ||||| | | || |||||||| Sbjct 265 ATCTTCCAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATCCCTTCCTT 206 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||||||| ||| ||| | || | | || | || |||||||| ||||| Sbjct 205 ATCTTGAATTTTTGCTTTTACATTTTCAATTGTATCGCTAGGTTCAACTTCAAGGGTAAT 146 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || || || | ||||| Sbjct 145 GGTTTTTCCGGTAAGTGTTTTAACAAAAATTTGCAT 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153768762681920