Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq724 84.2 4e-11 >seq724 Length=87760 Score = 84.2 bits (92), Expect = 4e-11 Identities = 89/114 (78%), Gaps = 4/114 (4%) Strand=Plus/Plus Query 189624 TAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATAT 189683 |||||||| | ||||| ||| | ||| |||| |||||| | ||||||||||| || || | Sbjct 25501 TAGGTTGTTTATGGTCAATTGGTGGAGTACATGATAGACCTTGGAAAGAAAGGCCAATTT 25560 Query 189684 TTGGAAAGATAAGATATATGAATTATGAGAGTT-CTA-AGAAGAAATTTGATGT 189735 |||| || ||||||||||||| || ||| ||| ||| ||||||||||| Sbjct 25561 TTGGGCTTATTAGATATATGAATTTAGACGGTTGCTATAGA--AAATTTGATGT 25612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923177909085480