Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq62 156 3e-33 >seq62 Length=56742 Score = 156 bits (172), Expect = 3e-33 Identities = 253/354 (71%), Gaps = 10/354 (3%) Strand=Plus/Minus Query 19993 GGAACGTTATCTGTATTTGGAATGCAATCTCGATA-TAACTTGAGAAATGAATTTCCCTT 20051 ||||| | ||| | ||||||| ||| ||| | |||| ||| || ||||| || Sbjct 54093 GGAACCATCTCTATTTTTGGAACTCAAATGAGATTCTCACTT-AGAGATAGTTTTCCATT 54035 Query 20052 ATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAA 20111 ||| ||||| |||| ||| ||||||||| || | | ||||||| |||||||||| || Sbjct 54034 ATTGACTACCAAACAGGTGTTTTGGAAAAGCATCTTAAAAGAGTTGCTATGGTTTATAAA 53975 Query 20112 AG--GATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACAT 20169 || ||| || ||| | | | ||| ||| || || ||||| ||| | | | Sbjct 53974 AGCTGAT--ACTAATGCAATACATCTTCGTGAACAAAACGTAAAGATATGGGAAGGAAAC 53917 Query 20170 GGATCTA-AGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGG 20228 ||| | ||| | |||| | | |||| || | | ||| |||| |||||| | || Sbjct 53916 TCATCAAGAGCT-TATTTAGATTCTATTGGACTTCATCATCGTGAAGAAGGGGATCTTGG 53858 Query 20229 TCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAA 20288 |||||| ||||| ||||||||||| |||||||||||| ||||||| || ||| | || || Sbjct 53857 TCCTGTCTATGGCTTTCAATGGAGGCATTTTGGAGCTCAATATGTCGATATGCATACCAA 53798 Query 20289 TTATTTTGGACAAGGAGTAGATCAA-TTACAAAATGTTATTAATTTAATTAAAA 20341 |||| ||| || || ||||||||| || | || |||||||||||||| |||| Sbjct 53797 TTATGATGGCCAGGGTGTAGATCAACTTGCTGAA-GTTATTAATTTAATCAAAA 53745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399176035904965