Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1531 127 2e-24 seq1530 127 2e-24 >seq1531 Length=18023 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 21767 CTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCC 21826 ||||||||||||||||| |||||||| || || || |||||||| ||||| |||| ||| Sbjct 8633 CTATACATTTCAGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAGAATCTAGCC 8692 Query 21827 TCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCA 21886 || | ||||| || || ||| | || | ||| ||||||||| || || |||||| Sbjct 8693 TCAGGCCATTGTACTTCATTTGCAAAACATTCAACCAGGTTTTCATTAACAATACCATCA 8752 Query 21887 CTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATC 21926 || || ||||| ||||||||||||| |||||||| || Sbjct 8753 CTAGCAGCAAAGAATGCCAATATATGGGATATAAAATGTC 8792 >seq1530 Length=18023 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 21767 CTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCC 21826 ||||||||||||||||| |||||||| || || || |||||||| ||||| |||| ||| Sbjct 8633 CTATACATTTCAGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAGAATCTAGCC 8692 Query 21827 TCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCA 21886 || | ||||| || || ||| | || | ||| ||||||||| || || |||||| Sbjct 8693 TCAGGCCATTGTACTTCATTTGCAAAACATTCAACCAGGTTTTCATTAACAATACCATCA 8752 Query 21887 CTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATC 21926 || || ||||| ||||||||||||| |||||||| || Sbjct 8753 CTAGCAGCAAAGAATGCCAATATATGGGATATAAAATGTC 8792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531889915979880