Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1466 145 7e-30 seq1258 145 7e-30 seq1155 145 7e-30 seq630 100 2e-16 >seq1466 Length=125466 Score = 145 bits (160), Expect = 7e-30 Identities = 174/230 (76%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||| |||||||||||||||||||| | ||||| | ||||| || ||| | Sbjct 71451 ATGCAGATTTTTATAAAAACATTAACTGGAAAAACTATTACTCTTGAAGTTGA-CCCATC 71509 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | |||||| || ||| ||||||||||| || || || ||||| Sbjct 71510 TGATACTATAGAAAATGTCAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCA 71569 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTAT 24167 |||||||||||| | || || |||||||| ||||||| |||| || ||| |||||| Sbjct 71570 ACAGAGACTGATATTCGCTGGAAAGCAACTTGAAGATGGTAGAACACTTTCA--GATTAT 71627 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||| ||||| ||| ||||||| || ||||| | | ||||| Sbjct 71628 AATGTTCAAAAGGAATCAACACTTCATTTGGTACTAAGACTTCGTGGAGG 71677 >seq1258 Length=100613 Score = 145 bits (160), Expect = 7e-30 Identities = 174/230 (76%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||| |||||||||||||||||||| | ||||| | ||||| || ||| | Sbjct 40210 ATGCAGATTTTTATAAAAACATTAACTGGAAAAACTATTACTCTTGAAGTTGA-CCCATC 40268 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | |||||| || ||| ||||||||||| || || || ||||| Sbjct 40269 TGATACTATAGAAAATGTCAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCA 40328 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTAT 24167 |||||||||||| | || || |||||||| ||||||| |||| || ||| |||||| Sbjct 40329 ACAGAGACTGATATTCGCTGGAAAGCAACTTGAAGATGGTAGAACACTTTCA--GATTAT 40386 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||| ||||| ||| ||||||| || ||||| | | ||||| Sbjct 40387 AATGTTCAAAAGGAATCAACACTTCATTTGGTACTAAGACTTCGTGGAGG 40436 >seq1155 Length=100669 Score = 145 bits (160), Expect = 7e-30 Identities = 174/230 (76%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||| |||||||||||||||||||| | ||||| | ||||| || ||| | Sbjct 60460 ATGCAGATTTTTATAAAAACATTAACTGGAAAAACTATTACTCTTGAAGTTGAC-CCATC 60402 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | |||||| || ||| ||||||||||| || || || ||||| Sbjct 60401 TGATACTATAGAAAATGTCAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCA 60342 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTAT 24167 |||||||||||| | || || |||||||| ||||||| |||| || ||| |||||| Sbjct 60341 ACAGAGACTGATATTCGCTGGAAAGCAACTTGAAGATGGTAGAACACTTTCA--GATTAT 60284 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||| ||||| ||| ||||||| || ||||| | | ||||| Sbjct 60283 AATGTTCAAAAGGAATCAACACTTCATTTGGTACTAAGACTTCGTGGAGG 60234 >seq630 Length=36350 Score = 100 bits (110), Expect = 2e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||| | |||||| ||||||||||| | ||||| | ||||| || | Sbjct 225 AATGCAGATTTTTATTAAAACACTAACTGGAAAAACTATTACACTTGAAGTGGATCCTTC 166 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| ||||| ||||| ||||| |||||||| ||||| Sbjct 165 TGACACTATTGAAAATGTAAAATCTAAGATCCAAGACAAGGAAGGTATACCTCCAGATCA 106 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| ||| |||||| | || || ||| | ||||||| |||| | | || || || Sbjct 105 ACAAAGATTGATTTTTGCTGGAAAACAATTGGAAGATGGAAGAACCCTTTCGGACTACAA 46 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGG 24214 ||||||| ||||| || | ||| | || | |||| ||||| Sbjct 45 TGTTCAAAAGGAATCCACCCTCCATCTTGTTCTTCGATTAAGAGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429927422373735