Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq62 111 2e-19 >seq62 Length=56742 Score = 111 bits (122), Expect = 2e-19 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 110917 GCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976 ||||| | | | |||||| || | ||||| || || ||| | || | || | | | Sbjct 50568 GCACAGTTTTTAAGTGTATCAAATATACCTTCTATGCTATCGTCTTTCATTGCCAACAAA 50509 Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036 || ||| |||||| ||||||||||| ||||| |||||||| | || || || |||||| Sbjct 50508 AAACAACTAGACATTTGAGGACGAGGTGTTCCAGCATTGAATAAGGTTGGAGTTGCATGA 50449 Query 111037 ATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCG 111096 | ||| || || ||||| | ||| ||||| || | ||| || | ||| | | Sbjct 50448 GTAAACCAACGTTCTGACATATAGTTATATGTTTCTATTGCAGATTCAATATCATCAAAA 50389 Query 111097 TGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATC 111155 || ||||||| ||||||| ||| ||||||| |||||| |||| | | |||||||| Sbjct 50388 TGTATACCAACAGCAACTCTCATCAACATATGTTGAGGTCTTTCCACAATTTTTCCATC 50330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588963948078600