Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1466 150 4e-31 seq1258 150 4e-31 seq1155 150 4e-31 seq1253 138 3e-27 seq630 138 3e-27 >seq1466 Length=125466 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || || ||||||| ||| ||||| | ||| ||||| |||||||| || ||| Sbjct 71653 TGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCAAGTTGC 71594 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || |||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct 71593 TTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCTTGAATTTTA 71534 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||| || || || || || || || |||||||| |||| || ||||| || Sbjct 71533 CTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTTTCCAGTT 71474 Query 195118 AAAGTTTTTACGAACACTTGCATTTA 195143 || ||||||| || | ||||| || Sbjct 71473 AATGTTTTTATAAAAATCTGCATCTA 71448 >seq1258 Length=100613 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || || ||||||| ||| ||||| | ||| ||||| |||||||| || ||| Sbjct 40412 TGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCAAGTTGC 40353 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || |||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct 40352 TTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCTTGAATTTTA 40293 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||| || || || || || || || |||||||| |||| || ||||| || Sbjct 40292 CTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTTTCCAGTT 40233 Query 195118 AAAGTTTTTACGAACACTTGCATTTA 195143 || ||||||| || | ||||| || Sbjct 40232 AATGTTTTTATAAAAATCTGCATCTA 40207 >seq1155 Length=100669 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || || ||||||| ||| ||||| | ||| ||||| |||||||| || ||| Sbjct 60258 TGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCAAGTTGC 60317 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || |||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct 60318 TTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCTTGAATTTTA 60377 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||| || || || || || || || |||||||| |||| || ||||| || Sbjct 60378 CTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTTTCCAGTT 60437 Query 195118 AAAGTTTTTACGAACACTTGCATTTA 195143 || ||||||| || | ||||| || Sbjct 60438 AATGTTTTTATAAAAATCTGCATCTA 60463 >seq1253 Length=11614 Score = 138 bits (152), Expect = 3e-27 Identities = 142/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || || ||||| || ||||||| |||||| || | ||| ||||| |||||||| Sbjct 11429 AACAAGATGGAGGGTGGATTCCTTTTGAACATTGTAGTCCGAAAGGGTTCTTCCATCTTC 11488 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | || || || || || || | || |||||| |||||||| || ||||| |||||||| Sbjct 11489 CAATTGTTTTCCAGCAAAAATCAATCTTTGTTGATCTGGAGGTATACCTTCCTTGTCTTG 11548 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || || ||||| ||||| ||||| ||| ||||||||||| |||| || || Sbjct 11549 GATCTTAGATTTTACGTTTTCAATAGTGTCAGAAGGATCCACTTCAAGTGTAATAGTTTT 11608 Query 195111 TCCTGT 195116 ||| || Sbjct 11609 TCCAGT 11614 >seq630 Length=36350 Score = 138 bits (152), Expect = 3e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || || ||||| || ||||||| |||||| || | ||| ||||| |||||||| Sbjct 15 AACAAGATGGAGGGTGGATTCCTTTTGAACATTGTAGTCCGAAAGGGTTCTTCCATCTTC 74 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | || || || || || || | || |||||| |||||||| || ||||| |||||||| Sbjct 75 CAATTGTTTTCCAGCAAAAATCAATCTTTGTTGATCTGGAGGTATACCTTCCTTGTCTTG 134 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || || || || ||||| ||||| ||| ||||||||||| |||| || || Sbjct 135 GATCTTAGATTTTACATTTTCAATAGTGTCAGAAGGATCCACTTCAAGTGTAATAGTTTT 194 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| || | ||||| | || | |||||| Sbjct 195 TCCAGTTAGTGTTTTAATAAAAATCTGCATT 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109458329663579