Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq62 168 8e-37 >seq62 Length=56742 Score = 168 bits (186), Expect = 8e-37 Identities = 932/1472 (63%), Gaps = 48/1472 (3%) Strand=Plus/Plus Query 75131 GACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCT-ATCTTCAACG--G 75187 |||||||||| | || |||||| | ||||||||||| |||| || |||| || | | Sbjct 50270 GACTATGATTATTCCTATTTTGGTTTTAAAACCCTTGA-AAGATCTTATCT--AATGAAG 50326 Query 75188 CTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATC 75247 | ||||| | | |||||| || || | ||||| ||| | || || | || || Sbjct 50327 ATAGATGGAAAAATTGTGGAAAGACCTCAACATATGTTGATGAGAGTTGCTGTTGGTATA 50386 Query 75248 CACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTC 75307 || || || ||||| |||| | || ||||| || | ||||| || || ||| Sbjct 50387 CATTTTGATGATATTGAATCTGCAATAGAAACATATAACTATATGTCAGAACGTTGGTTT 50446 Query 75308 ATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGC 75367 | ||| ||||| |||||| | ||||||||||| ||||| | || || ||||| ||||| Sbjct 50447 ACTCATGCAACTCCAACCTTATTCAATGCTGGAACACCTCGTCCTCAAATGTCTAGTTGT 50506 Query 75368 TTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGT 75427 || | | || | || || || || | ||||| | || || |||| | ||| Sbjct 50507 TTTTTGTTGGCAATGAAAGACGATAGCATAGAAGGTATATTTGATACACTTAAAAACTGT 50566 Query 75428 GCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGA-TGCACATCCATGATGTGAGAGCCAA 75486 || ||||| || | || || || | ||||| | || || ||| || | |||| Sbjct 50567 GCTATGATCTCCAAATTTGCCGGTGG-AGTGGGACTACATATTCATAATATTCGAGCTTG 50625 Query 75487 TAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGT 75546 | | |||| || || |||||| | || |||| ||| ||||| | | || || Sbjct 50626 TGGTACATATATTGCAGGAACGAATGGTAATTCTAATGGAATTGTTCCACTTTTACGAGT 50685 Query 75547 ATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCAT 75600 | ||| | || || || | |||| || ||||| || || || | Sbjct 50686 TTACAACAATTGTTCTCGTTACGTTGACCAAGGTGGAAACAAGCGTC-CA--GGCTCATT 50742 Query 75601 CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAA 75660 || | || || || ||||||||||||||||| | || || | || | ||| || Sbjct 50743 TGCCATATATTTAGAGCCATGGCATGCCGATATAGTAGAATTTTTAGATCTTCGAAAAAA 50802 Query 75661 CCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCT 75720 ||| || || ||| ||| ||||| || | || | ||||| ||||| | Sbjct 50803 TACTGGTAGTGAGGATATTCGTGCTAGGGATCTTTTCTATGCCTTATGGATACCAGATTT 50862 Query 75721 TTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCAC 75779 || ||||| || || || ||| ||||| ||| | || || | || || | Sbjct 50863 GTTTATGAAACGAGTAGAAAGTAATGGAATCTGGTCACTTATGTGCCCTCATGAATGC-C 50921 Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839 | || || || || ||||| ||||||||| || |||| |||||||||| | | Sbjct 50922 CTGGACTTTCGGATTGTTACGGTGAAAAGTTTGAAGAACTGTACATAAAGTATGAAAAAG 50981 Query 75840 AGGGTAGAGCCAATGCGACTG-TACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCA 75898 | || || ||| || | | ||| | | ||| || || || | Sbjct 50982 AAGGGCGATACAAA-CGTCAAATTGAAGCTCAAAAACTATGGTTTTTCATACTAGAAGCT 51040 Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 || | || ||||| ||| |||||||||||||| ||||||||||| | || || || Sbjct 51041 CAAATTGAAACTGGTCAACCTTATATGCTTTACAAAGATGCTTGTAATAGTAAAAGCAAT 51100 Query 75959 CAAAAGAATTTGGGAACAATCAAG---AGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| ||| | || || ||| ||| ||||| ||||| ||||| | || ||| Sbjct 51101 CAAAAAAATCTTGGTGTTATTAAGTCTAGC---AATCTGTGCACAGAAATAATTGAATAC 51157 Query 76016 ACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC 76075 || ||||||||||| ||||| |||||||| ||||| | | ||| |||| | ||| Sbjct 51158 TCATCAAAGGATGAGACTGCTGTGTGCAATTTAGCATCGTTATCTCTTTCAAAATTTGTT 51217 Query 76076 AAT----------GAAGAGACTCGCACT------TTTGATTATGAAAAACTTCATGAAAT 76119 || | | || || ||| ||| ||| ||| ||||||||| | Sbjct 51218 TATCCTAAATCTAGTACCGATTC-AACTAATGTATTTCATTTTGATAAACTTCATACCGT 51276 Query 76120 CACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGA 76179 ||||| ||| | ||| ||||| ||| ||||| ||||| || ||||| || Sbjct 51277 TACAAAAGTTGCTGTTCGTAATTTAAACAAAGTTATTGATAGAAACTTCTATCCTATTAT 51336 Query 76180 GACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGC 76239 || || || || ||||| || || || ||||| | ||||| ||||| | || Sbjct 51337 TGAAGCCTATAATTCAAACATGCGTCATAGGCCAATTGGAGTTGGTGTACAAGGATTAGC 51396 Query 76240 GGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGC 76299 |||| |||| | || | | | ||||| || ||||| || | | ||| Sbjct 51397 TGATGCATTTGTATTATTAAGGATGCCTTTTGACAGTGAAGAAGCTAAAAAATTAAATAT 51456 Query 76300 TCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGC 76359 | || |||||||| || ||||| | | || || || |||||||| ||| ||| Sbjct 51457 ACAAATATTTGAAACAATTTATCATGGTGCGCTTGAAGCATCATGTGAATTAGCTAAAGA 51516 Query 76360 CCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGA 76419 | ||| | ||||| |||| || ||| ||| ||| || | ||||||| ||| Sbjct 51517 ATATGGTCCATATGAAACATACGAAGGTAGTCCTATCAGCCAGGGAATTCTTCAGTATGA 51576 Query 76420 TATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGGATGTTCTCAAGGAACGCATC 76477 ||||| |||| || | || | || | | | || ||| | | ||| || || Sbjct 51577 TATGT-GGAATGTAACGCCTA-CTGATCTTTGGGATTGGAACACGTTGAAGCAAGATATA 51634 Query 76478 AAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCA 76537 || || | ||| || | || || |||||||| |||| ||||| ||||| || || || Sbjct 51635 AAAAAGTATGGTGTTAGAAATAGCCTTTTGATTTCACCTATGCCTACAGCATCTACTTCA 51694 Query 76538 CAAATCTTGGGTAATAATGAATGCTTTGAACC 76569 ||||| | || ||||||||| |||||||| Sbjct 51695 CAAATTCTCGGCAATAATGAAGCTTTTGAACC 51726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596557392694560