Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq630 167 2e-36 seq62 152 5e-32 seq1466 141 8e-29 seq1258 141 8e-29 seq1155 141 8e-29 seq1253 132 4e-26 >seq630 Length=36350 Score = 167 bits (184), Expect = 2e-36 Identities = 170/219 (78%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||||||||||| ||||| || ||||||||||| || ||||| || | | Sbjct 224 ATGCAGATTTTTATTAAAACACTAACTGGAAAAACTATTACACTTGAAGTGGATCCTTCT 165 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| |||||| |||||||||||||| ||||| |||||||| |||||| Sbjct 164 GACACTATTGAAAATGTAAAATCTAAGATCCAAGACAAGGAAGGTATACCTCCAGATCAA 105 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| ||||| || ||||| |||| ||| |||| | | || || || || Sbjct 104 CAAAGATTGATTTTTGCTGGAAAACAATTGGAAGATGGAAGAACCCTTTCGGACTACAAT 45 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTGTTGCGATT 24921 ||||||||||||| || || || |||| | || ||||| Sbjct 44 GTTCAAAAGGAATCCACCCTCCATCTTGTTCTT-CGATT 7 >seq62 Length=56742 Score = 152 bits (168), Expect = 5e-32 Identities = 652/1012 (64%), Gaps = 30/1012 (3%) Strand=Plus/Minus Query 138443 GATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGT 138502 ||||| | || ||||| || | | ||| || || | ||| ||| ||| | ||| ||| Sbjct 51842 GATTTTTTATATCATCATTCCAAATATTTAAATTAACCAAATCGCTTAGTAAATACTTGT 51783 Query 138503 TTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCT 138562 ||| || ||||||||||| | || || || | | ||||| ||| | || ||||| | Sbjct 51782 TTACTACTTGAAATTCACCTGATAAAACACGTCTAGAATAAATATTGCTCGTAAAAGGTT 51723 Query 138563 CAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCA 138622 |||| | ||| || || || ||||| || | || | || || ||||| | | || Sbjct 51722 CAAAAGCTTCATTATTGCCGAGAATTTGTGAAGTAGATGCTGTAGGCATAGGTGAAATCA 51663 Query 138623 AAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACA 138682 |||| ||| | | ||| | || || || ||| | || ||| ||||| | Sbjct 51662 AAAGGCTATTTCTAACACCATACTTTTTTATATCTTGCTTCAACGTGTTCCAATCCCAAA 51603 Query 138683 AATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGC 138742 ||| |||| || ||||||||||| ||||| | |||||| || ||||| | Sbjct 51602 GATCAGTAGGCGTTACATTCCACATATCATACTGAAGAATTCCCTGGCTGATAGGACTAC 51543 Query 138743 CTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGT-TGCTCGCCTCGAGCGCA 138801 ||||||| | || ||| |||| | |||| || || || || | || || |||||| Sbjct 51542 CTTCGTATGTTTCATATGGACCATATTCTTTAGCTAATTCACATGAT-GCTTCAAGCGCA 51484 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861 |||| ||||| ||||| || || ||| | | || || | || || | Sbjct 51483 CCATGATAAATTGTTTCAAATATTTGTATATTTAATTTTTTAGCTTCTTCACTGTCAAAA 51424 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 ||||| | | | || || || || | ||||| || || ||||| | || | | Sbjct 51423 GGCATCCTTAATAATACAAATGCATCAGCTAATCCTTGTACACCAACTCCAATTGGCCTA 51364 Query 138922 TGGCGCAGATTTGACGCTTTTGCGGCTTCGATA---GGATAATAGTTTACATCGATGATT 138978 || |||| ||||| || |||||| ||| ||||| ||||| ||| || | | Sbjct 51363 TGACGCATGTTTGAA---TTATAGGCTTCAATAATAGGATAGAAGTTTCTATCAATAACT 51307 Query 138979 TTGTTTAAATTTCGCACGACCACCTTAGTC---GTATGCT-TTAATCGT--TCAAAATCG 139032 ||||||||||| || || | || || || ||||| || ||| | ||| | Sbjct 51306 TTGTTTAAATTACGAACAGCAACTTTTGTAACGGTATGAAGTTTATCAAAATGAAATACA 51247 Query 139033 TATGT-GCCCCCGTTGTCG-TCGACGACGTCGACAAATTTGTTGACACAAAT--CGAGGC 139088 | || | | || | | | | || | |||||||| ||| | | || ||| || Sbjct 51246 TTAGTTGAATCGGTACTAGATTTAGGA--TAAACAAATTT--TGAAAGAGATAACGATGC 51191 Query 139089 TATGTTGCACACCGCCACTTCGTCGGGGTCGCTG--TATTCGACAATTTCGGCACACAAA 139146 || |||||||| || || || | | || ||||| | ||||| | |||| | Sbjct 51190 TAAATTGCACACAGCAGTCTCATCCT--TTGATGAGTATTCAATTATTTCTGTGCACAGA 51133 Query 139147 TTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTG 139206 || ||| |||| || ||| | ||||| |||||||||||| | ||||||||||||||| Sbjct 51132 TTGCTAGACTTAATAACACCAAGATTTTTTTGATTGCTTTTACTATTACAAGCATCTTTG 51073 Query 139207 TAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-AGTC 139265 ||||||||||| ||| |||||||| | ||| | |||| ||||| | || ||| Sbjct 51072 TAAAGCATATAAGGTTGACCAGTTTCAATTTGAGCTTCTAGTATGAA--AAACCATAGTT 51015 Query 139266 CCT-AGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGT 139324 | ||||| |||||||| ||| | | || || |||||| ||| ||||| | Sbjct 51014 TTTGAGCTTCAATTTGACGTTTGTATCGCCCTTCTTTTTCATACTTTATGTACAGTTCTT 50955 Query 139325 CGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACC 139384 | || ||||||||| || ||||| | | || | | ||| ||||| || |||| Sbjct 50954 CAAACTTTTCACCGTAACAATCCGAAAGTCCAGGGCATTCATGAGGGCACATAAGTGACC 50895 Query 139385 ATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGC 139436 | | || || | || || |||| |||| ||| || ||||| || || Sbjct 50894 AGATTCCATTACTTTCTACTCGTTTCATAAACAAATCTGGTATCCATAAGGC 50843 >seq1466 Length=125466 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||||| ||||| |||| || ||||||||||| || ||||| || | | Sbjct 71450 GATGCAGATTTTTATAAAAACATTAACTGGAAAAACTATTACTCTTGAAGTTGACCCATC 71509 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| || ||| || || |||||||||||||| || || || ||||| Sbjct 71510 TGATACTATAGAAAATGTCAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCA 71569 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||| || || || || || || || ||| |||| | ||||||||||| Sbjct 71570 ACAGAGACTGATATTCGCTGGAAAGCAACTTGAAGATGGTAGAACACTTTCAGATTATAA 71629 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||| ||||| || ||||| | || | || ||||| Sbjct 71630 TGTTCAAAAGGAATCAACACTTCATTTGGTACTAAGACTTCGTGGAGG 71677 >seq1258 Length=100613 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||||| ||||| |||| || ||||||||||| || ||||| || | | Sbjct 40209 GATGCAGATTTTTATAAAAACATTAACTGGAAAAACTATTACTCTTGAAGTTGACCCATC 40268 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| || ||| || || |||||||||||||| || || || ||||| Sbjct 40269 TGATACTATAGAAAATGTCAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCA 40328 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||| || || || || || || || ||| |||| | ||||||||||| Sbjct 40329 ACAGAGACTGATATTCGCTGGAAAGCAACTTGAAGATGGTAGAACACTTTCAGATTATAA 40388 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||| ||||| || ||||| | || | || ||||| Sbjct 40389 TGTTCAAAAGGAATCAACACTTCATTTGGTACTAAGACTTCGTGGAGG 40436 >seq1155 Length=100669 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||||| ||||| |||| || ||||||||||| || ||||| || | | Sbjct 60461 GATGCAGATTTTTATAAAAACATTAACTGGAAAAACTATTACTCTTGAAGTTGACCCATC 60402 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| || ||| || || |||||||||||||| || || || ||||| Sbjct 60401 TGATACTATAGAAAATGTCAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCA 60342 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||| || || || || || || || ||| |||| | ||||||||||| Sbjct 60341 ACAGAGACTGATATTCGCTGGAAAGCAACTTGAAGATGGTAGAACACTTTCAGATTATAA 60282 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||| ||||| || ||||| | || | || ||||| Sbjct 60281 TGTTCAAAAGGAATCAACACTTCATTTGGTACTAAGACTTCGTGGAGG 60234 >seq1253 Length=11614 Score = 132 bits (146), Expect = 4e-26 Identities = 148/195 (76%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || || ||||||||||| || ||||| || | | ||||| | |||| |||||| Sbjct 11614 ACTGGAAAAACTATTACACTTGAAGTGGATCCTTCTGACACTATTGAAAACGTAAAATCT 11555 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| ||||| |||||||| ||||||||| | ||||| ||||| || ||| Sbjct 11554 AAGATCCAAGACAAGGAAGGTATACCTCCAGATCAACAAAGATTGATTTTTGCTGGAAAA 11495 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA- 24906 || |||| ||| |||| | | || || || || ||||||||||||| || || || Sbjct 11494 CAATTGGAAGATGGAAGAACCCTTTCGGACTACAATGTTCAAAAGGAATCCACCCTCCAT 11435 Query 24907 CTTGGTGTTGCGATT 24921 |||| | || ||||| Sbjct 11434 CTTGTTCTT-CGATT 11421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449888393970360