Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq62 91.5 2e-13 >seq62 Length=56742 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 180520 TTTAGATTCTTGTGGATTTCATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATT 180579 |||||||||| |||| ||||| ||| ||||||| ||| | || || | ||||| || Sbjct 53902 TTTAGATTCTATTGGACTTCATCATCGTGAAGAAGGGGATCTTGGTCCTGTCTATGGCTT 53843 Query 180580 TCAATGGAGACATGCAGGAGCTCAATATATTGACTGTG-ATACCAACTATATCGGGCAAG 180638 ||||||||| ||| |||||||||||| | || | || ||||||| ||| || || | Sbjct 53842 TCAATGGAGGCATTTTGGAGCTCAATATGTCGA-TATGCATACCAATTATGATGGCCAGG 53784 Query 180639 GTATAGACCAATTAAGCCAAGTTATAGAAACTATAAAAAATAATCCCGAATGCCGAAGAA 180698 || |||| ||| | ||||||| | || |||||| ||||| | || || | | Sbjct 53783 GTGTAGATCAACTTGCTGAAGTTATTAATTTAATCAAAAATGATCCCTATAGCAGACGGA 53724 Query 180699 TAATCAT 180705 |||| || Sbjct 53723 TAATAAT 53717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655266591333000