Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq62 648 2e-180 seq1239 309 2e-78 seq1238 309 2e-78 seq72 172 4e-37 seq1435 136 3e-26 seq1434 136 3e-26 seq1620 132 4e-25 seq723 132 4e-25 seq1424 127 2e-23 seq1423 127 2e-23 seq95 109 4e-18 >seq62 Length=56742 Score = 648 bits (718), Expect = 2e-180 Identities = 1063/1516 (70%), Gaps = 26/1516 (2%) Strand=Plus/Plus Query 281377 ATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATT 281436 || ||||||||| ||||| || || ||| || || |||||||| | || | || || Sbjct 8196 ATCATTAGTAATGGTAATTTTGTTTTGTTTATTAGTCGATTTATCTACAGCTGATACGTT 8255 Query 281437 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 281496 | ||||||||| ||||| | |||||||||||||||||| ||||| || || | |||| Sbjct 8256 CAAAATACCATTTGCATCAATATCAAATGTGACTTCAATCTGAGGAACACCACGTGGAGC 8315 Query 281497 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 281556 ||| || || || | | |||| | |||| | || |||||| || || | || Sbjct 8316 AGGAGGAATACCAGTAAGTTCAAATTTGCCCAAAAGATGATTATCCTTGGTCATAGGACG 8375 Query 281557 TTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATAC 281616 ||| |||||||||| ||| || || ||| |||||| || | |||||| ||||| Sbjct 8376 TTCTCCCTCGAAAACTTGAATTAAGACACCAGGTTGATTGTCAGCATAAGTACTAAATGT 8435 Query 281617 TCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 | | || ||| ||||| || || ||||| | || | | | ||||| | ||||| Sbjct 8436 TTGAGTTTGCTTAGTGGGAATGGTAGTATTTCTTTTGATTAAAGTAGTCATGACGCCACC 8495 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| ||||||| ||||| ||||| || | ||||||| || | || || ||||| Sbjct 8496 AGCAGTTTCTATTCCAAGTGAAAGCGGTGCAACATCAAGTAATAAAACATCTTGAATCGC 8555 Query 281737 TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 ||||| | | ||| ||||| ||||| || || | ||||||||||||||||||||| || Sbjct 8556 TTCATGTTTATCACCTACAAGGATAGCAGCCTGTACAGCAGCACCATATGCAACAGCCTC 8615 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856 ||||||||| | || || | || || |||||||||||| |||| | ||| | | | Sbjct 8616 ATCAGGATTTATAGATTTACATAATTCTTTACCATTGAAGAAATCTTGAAGCAATGATTG 8675 Query 281857 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 281916 || ||||||||||||| ||||| ||||| | || | | || || |||| ||| | Sbjct 8676 AACTTTAGGAATACGAGTGGATCCACCAACAAGGACTACCTGATCGAC-TGTGTTTTTGC 8734 Query 281917 CA-GTTTTGAATCCAATAAAACTTTT-TCAACGGGTTCAAGACCAGCTCTAAACAAGTCT 281974 | | | |||| ||| || | || || || ||| |||||||||| Sbjct 8735 TAAGACCGGCATCCT-TAAGACACTGCTCCACAGGAGTAAGTGTCTTATTAAACAAGTCA 8793 Query 281975 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAAC 282034 || || | || ||||| |||| | |||| | || ||||| ||||| || Sbjct 8794 GAGCACAAGTCCTCGAAACGAGCTTTTGTAATTGATGTATGTAAATCATGTCCTTGATAC 8853 Query 282035 AAAGAATCAACTTCAATCGTAGTTTGAGT---CGAAGAAGATAGTGCACGTTTAGCACGT 282091 |||||||||| |||||| | | ||| ||| ||| | ||| | | ||||||||| Sbjct 8854 AAAGAATCAATTTCAATGCTGGCAACAGTACTCGATGAA-AGAGTTCTC--TTAGCACGT 8910 Query 282092 TCACATGCTGTCCTTAGTCTTCGTAAG---GCTTTTGCTGATTGATTCAA-ATCTGTTTT 282147 |||||||| || || ||||||| ||| || |||| | ||| || |||| || Sbjct 8911 TCACATGCAGTTCTAAGTCTTC-TAACCGCGCGTTTGTT---TGAAGAAATATCTTGATT 8966 Query 282148 ATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACC 282207 ||||||||||||||| || ||| | | | || | | |||||||||||||||||| Sbjct 8967 ATATTTTCTCTTGAATTCAGCAATAAAATGAGCAACCATTCTATTATCAAAATCTTCACC 9026 Query 282208 TCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAA 282267 ||||| | |||| ||| |||||| | |||| || | ||||| |||| | | Sbjct 9027 ACCCAAATGTGTATCACCTCCAGTAGCTTTAACTTCAAATACACCATCCTCAATACTTAG 9086 Query 282268 AAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC 282327 || || |||||| || |||||||| | ||||||||| | | || |||||| | Sbjct 9087 AATAGAGACATCAAATGTACCACCACCAAGATCAAAAATTAAAATATGTTGTTCTTTTTG 9146 Query 282328 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 || ||||||||||| ||||| |||| |||||||| || ||||||||||| ||||| | Sbjct 9147 ATGTTTTTTATCAAGTCCATATGCAATTGCAGCAGCTGTAGGTTCATTAATTATTCTAAG 9206 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 ||||||||| ||||||||| || ||||||||||| ||||| | ||| ||| ||||| Sbjct 9207 AACATTAAGGCCAGCAATTTGACCAGCATCTTTAGTAGCTTGACGTTGACTATCATTAAA 9266 Query 282448 ATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGT 282507 || || ||| |||||||| |||||| | | || | |||| ||| || ||||| Sbjct 9267 GTAGGCTGGACATGTAATAACAGCATCTTTAATTTTTCCGCCAAGATATGCCTCAGCTGT 9326 Query 282508 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTC 282567 || ||||| ||| || | ||||||||| |||| ||| |||||| || || ||| Sbjct 9327 TTCCTTCATCTTAACTAGTACCATTGATGAGATTTCTTCAGGAGAAAATATTTTAACTTC 9386 Query 282568 -ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCC 282626 |||| ||| |||| || | ||| || |||| ||| ||||| ||||||||| Sbjct 9387 GCCCTTGA-ATGTAACTTTAATTTTTGGCTTGCCACCATCATCGATAACAGTAAATGGCC 9445 Query 282627 AATATTTCATATCTGATTGAAC---ACTTTGGTCATTAAAATCTCTACCAATTAATCGTT 282683 | | ||||||||| | |||||| ||| |||||||| | ||||||||| | |||| Sbjct 9446 AGTGTTTCATATCAGCTTGAACTGAACT---CTCATTAAACTTTCTACCAATAAGACGTT 9502 Query 282684 TTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAA 282743 | |||||||||| ||||| |||||||| ||||| ||| ||| || ||||| |||| Sbjct 9503 TAGCATCAAAAACTGTATTAGTTGGATTCTGGGCAGCCTGACTTTTAGCAGCATCACCAA 9562 Query 282744 TCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 282803 ||| ||| |||||||| | |||||| |||||||| | ||||| ||||| | Sbjct 9563 TCAATCTTTCAACATCTGTAAAAGCAACATAACTAGGAGTTGTTCTGTTACCCTGATCGT 9622 Query 282804 TCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTA 282863 | | ||| ||||||||||| |||| || | || || |||||| | | || ||||| | Sbjct 9623 TAGAAATTATTTCAACTTTTCCATGCTGAAAAACGCCAACACAAGAATATGTCGTTCCAA 9682 Query 282864 AATCAATACCAATAGC 282879 |||||||||||| || Sbjct 9683 GATCAATACCAATTGC 9698 Score = 111 bits (122), Expect = 1e-18 Identities = 308/472 (65%), Gaps = 9/472 (2%) Strand=Plus/Plus Query 163970 TCGCAATCTCAATAATATTATTGACATTAATTTCTATCCTCTCGATAAAACTCGGATTAC 164029 ||| ||| | || || ||||||| | || ||||||||| | | || | | | | Sbjct 51292 TCGTAATTTAAACAAAGTTATTGATAGAAACTTCTATCCTATTATTGAAGCCTATAATTC 51351 Query 164030 CAATCTTCGTGATCGTCCTATTGGTATTGGAGTTCAGGGATTGGCTGATGTATTTGCCAT 164089 || | ||| || | || ||||| |||| || || ||||| ||||||| ||||| | Sbjct 51352 AAACATGCGTCATAGGCCAATTGGAGTTGGTGTACAAGGATTAGCTGATGCATTTGTATT 51411 Query 164090 GTTTAAGACTCCTTTTGATTCGGAAATTGCTCGTGATCTCAATCGTAAAATTTTCGAAAC 164149 || | || |||||||| ||| ||| | | ||| |||| || ||||| Sbjct 51412 ATTAAGGATGCCTTTTGACAGTGAAGAAGCTAAAAAATTAAATATACAAATATTTGAAAC 51471 Query 164150 AATTTATTATGGAGCTTTAACAGAATCCAATAAACTTGCTAGAGAATTTGGTACATATCA 164209 ||||||| |||| || | || ||| | || | |||| ||||| |||| ||||| | Sbjct 51472 AATTTATCATGGTGCGCTTGAAGCATCATGTGAATTAGCTAAAGAATATGGTCCATATGA 51531 Query 164210 AACTTATCAAGGAAGTCCTATTTCTCAAGGAAAATTCCAATTTGATCTTTGGAATTTCGA 164269 ||| || |||| |||||||| || |||| | || | |||| | |||||| | Sbjct 51532 AACATACGAAGGTAGTCCTATCAGCCAGGGAATTCTTCAGTATGATATGTGGAATGT--- 51588 Query 164270 TAAATCACAATTGAGCGGAATGTGGGATTGGGAACTTTTGCGTCAAGAAATTTTAAATCA 164329 || | | ||| | | ||||||||| | ||| ||||| || ||| | Sbjct 51589 --AACGCCTACTGATC----TTTGGGATTGGAACACGTTGAAGCAAGATATAAAAAAGTA 51642 Query 164330 TGGTGTTCGTAATAGTCTAGTTACAACCTGTATGCCAACTGCAAGTACTTCTCAAATTAT 164389 ||||||| | ||||| || | | | |||||| || ||| |||||| |||||| | Sbjct 51643 TGGTGTTAGAAATAGCCTTTTGATTTCACCTATGCCTACAGCATCTACTTCACAAATTCT 51702 Query 164390 GGGATGGAATGAATGTATTGAACCTTATACAGAAAATATTTATTCAAGAAGT 164441 || |||||| | ||||||||| ||| ||||||||||| ||| || Sbjct 51703 CGGCAATAATGAAGCTTTTGAACCTTTTACGAGCAATATTTATTCTAGACGT 51754 >seq1239 Length=42021 Score = 309 bits (342), Expect = 2e-78 Identities = 490/694 (71%), Gaps = 14/694 (2%) Strand=Plus/Minus Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 ||| |||||||||||||| ||||| | |||| || || || |||| ||| | Sbjct 18562 ATTGTCAAAATCTTCACCACCCAAATGTGTATCACCATTAGTGGCAACCACTTCGAATAC 18503 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 || | |||| | ||| | | |||||| || |||||||| | ||||||| | Sbjct 18502 ACCTTGGTCAATTGTCAATAATGATACATCAAACGTACCACCACCAAGGTCAAAAACTAA 18443 Query 282310 TACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369 || ||| |||| |||| ||||||||| ||||| |||| |||||||||||| || Sbjct 18442 TATATTTTTTTCACCCTCTT---TTTTATCAAAGCCATATGCAATAGCAGCAGCAGTAGG 18386 Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 |||||||| |||||||| |||||||||||||| || | |||||||||||||| | ||| Sbjct 18385 TTCATTAACAATTCTCATTACATTAAGACCAGCTATCATACCTGCATCTTTAGTAGATTG 18326 Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTTTTC 282488 | ||| | ||| ||||| ||||||||||||||||| || |||| |||| || ||| Sbjct 18325 ACGTTGAGCATCATTAAAGTATGCAGGAACAGTAATTACAGCATGAGTTATATTAGCTTC 18266 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548 || || || || ||| ||||||||| | | || ||| || ||||| ||||| Sbjct 18265 TAA-ATTAGTTTCAGCAATTTCTTTCATTTTCATGAGAACCATAGAACTAATTTCTTCTG 18207 Query 282549 GAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 282608 | | | || | || || || | | ||||||| || |||| |||| || Sbjct 18206 GTGTAAATCGTTTCATTTTATCACCAACTTTCACTTCAACCATGGGCTTATCACCAGAAT 18147 Query 282609 TAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTT--TGGTCATTAAAATC 282666 | | |||||||||||||| |||||||||| || | |||| |||||||||| | Sbjct 18146 TTACTACTTTAAATGGCCATACTTTCATATCT--TTTACAACTTCAGGGTCATTAAACTT 18089 Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 ||||||||| |||| |||||||||| | | ||||| ||||| || ||||| Sbjct 18088 TCTACCAATCAATCTTTTTGCATCATATACGGTATTTTCAGGATTTGATGTTAGTTGATT 18029 Query 282727 TTTGGCTGCATCTCCAATCAGA--TGTTCTGTCTCTGTA--AATGAAACATATGATGGAG 282782 || || | ||| ||||| ||| ||| | ||| |||| |||| |||||||||||||| Sbjct 18028 CTTAGCAGAATCACCAATAAGACGTGTACCATCT-TGTAAGAATGCAACATATGATGGAG 17970 Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842 || | ||||| ||||| |||||| || |||||||| || |||| | ||||| | Sbjct 17969 TTATACGATTTCCTTGTTCATTCTGAAATATTTCAACACGTCCTCTTTGAAAAACACCAA 17910 Query 282843 CACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 |||| | | || ||||| | ||| |||||||| Sbjct 17909 CACATGAATATGTAGTTCCCAGATCGATACCAAT 17876 Score = 93.3 bits (102), Expect = 3e-13 Identities = 199/293 (68%), Gaps = 16/293 (5%) Strand=Plus/Minus Query 85956 ATAGTCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAA--TGTTCTAAAT 86013 || |||||||||||| || ||||||||||||| |||| || || ||| ||| ||| Sbjct 18562 ATTGTCAAAATCTTCACCACCCAAATGTGTATCACCA-TTAGTGGCAACCACTTC-GAAT 18505 Query 86014 ACTCCATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACA 86073 || || | || ||| ||| || ||||| || || ||| | || | |||| |||| Sbjct 18504 ACACCTTGGTCAATTGTCAATAATGATACATCAAACGTACCACCACCAAGGTCAAAAACT 18445 Query 86074 ATTACGTTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCT 86133 | || || ||||||| || |||| | | || || ||||||| ||| Sbjct 18444 AATA---TA-------TTTTTTTCACCCTCTTTT--TTATCAAAGCCATATGCAATAGCA 18397 Query 86134 GCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCA 86193 || ||||| |||||||||| ||| | | |||| | ||| || || || | | ||| Sbjct 18396 GCAGCAGTAGGTTCATTAACAATTCTCATTACATTAAGACCAGCTATCATACCTGCATCT 18337 Query 86194 AGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGC 86246 ||| | ||| | || || |||||||| ||||| || |||||||| || || Sbjct 18336 TTAGTAGATTGACGTTGAGCATCATTAAAGTATGCAGGAACAGTAATTACAGC 18284 >seq1238 Length=42030 Score = 309 bits (342), Expect = 2e-78 Identities = 490/694 (71%), Gaps = 14/694 (2%) Strand=Plus/Minus Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 ||| |||||||||||||| ||||| | |||| || || || |||| ||| | Sbjct 18562 ATTGTCAAAATCTTCACCACCCAAATGTGTATCACCATTAGTGGCAACCACTTCGAATAC 18503 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 || | |||| | ||| | | |||||| || |||||||| | ||||||| | Sbjct 18502 ACCTTGGTCAATTGTCAATAATGATACATCAAACGTACCACCACCAAGGTCAAAAACTAA 18443 Query 282310 TACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369 || ||| |||| |||| ||||||||| ||||| |||| |||||||||||| || Sbjct 18442 TATATTTTTTTCACCCTCTT---TTTTATCAAAGCCATATGCAATAGCAGCAGCAGTAGG 18386 Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 |||||||| |||||||| |||||||||||||| || | |||||||||||||| | ||| Sbjct 18385 TTCATTAACAATTCTCATTACATTAAGACCAGCTATCATACCTGCATCTTTAGTAGATTG 18326 Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTTTTC 282488 | ||| | ||| ||||| ||||||||||||||||| || |||| |||| || ||| Sbjct 18325 ACGTTGAGCATCATTAAAGTATGCAGGAACAGTAATTACAGCATGAGTTATATTAGCTTC 18266 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548 || || || || ||| ||||||||| | | || ||| || ||||| ||||| Sbjct 18265 TAA-ATTAGTTTCAGCAATTTCTTTCATTTTCATGAGAACCATAGAACTAATTTCTTCTG 18207 Query 282549 GAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 282608 | | | || | || || || | | ||||||| || |||| |||| || Sbjct 18206 GTGTAAATCGTTTCATTTTATCACCAACTTTCACTTCAACCATGGGCTTATCACCAGAAT 18147 Query 282609 TAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTT--TGGTCATTAAAATC 282666 | | |||||||||||||| |||||||||| || | |||| |||||||||| | Sbjct 18146 TTACTACTTTAAATGGCCATACTTTCATATCT--TTTACAACTTCAGGGTCATTAAACTT 18089 Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 ||||||||| |||| |||||||||| | | ||||| ||||| || ||||| Sbjct 18088 TCTACCAATCAATCTTTTTGCATCATATACGGTATTTTCAGGATTTGATGTTAGTTGATT 18029 Query 282727 TTTGGCTGCATCTCCAATCAGA--TGTTCTGTCTCTGTA--AATGAAACATATGATGGAG 282782 || || | ||| ||||| ||| ||| | ||| |||| |||| |||||||||||||| Sbjct 18028 CTTAGCAGAATCACCAATAAGACGTGTACCATCT-TGTAAGAATGCAACATATGATGGAG 17970 Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842 || | ||||| ||||| |||||| || |||||||| || |||| | ||||| | Sbjct 17969 TTATACGATTTCCTTGTTCATTCTGAAATATTTCAACACGTCCTCTTTGAAAAACACCAA 17910 Query 282843 CACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 |||| | | || ||||| | ||| |||||||| Sbjct 17909 CACATGAATATGTAGTTCCCAGATCGATACCAAT 17876 Score = 93.3 bits (102), Expect = 3e-13 Identities = 199/293 (68%), Gaps = 16/293 (5%) Strand=Plus/Minus Query 85956 ATAGTCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAA--TGTTCTAAAT 86013 || |||||||||||| || ||||||||||||| |||| || || ||| ||| ||| Sbjct 18562 ATTGTCAAAATCTTCACCACCCAAATGTGTATCACCA-TTAGTGGCAACCACTTC-GAAT 18505 Query 86014 ACTCCATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACA 86073 || || | || ||| ||| || ||||| || || ||| | || | |||| |||| Sbjct 18504 ACACCTTGGTCAATTGTCAATAATGATACATCAAACGTACCACCACCAAGGTCAAAAACT 18445 Query 86074 ATTACGTTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCT 86133 | || || ||||||| || |||| | | || || ||||||| ||| Sbjct 18444 AATA---TA-------TTTTTTTCACCCTCTTTT--TTATCAAAGCCATATGCAATAGCA 18397 Query 86134 GCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCA 86193 || ||||| |||||||||| ||| | | |||| | ||| || || || | | ||| Sbjct 18396 GCAGCAGTAGGTTCATTAACAATTCTCATTACATTAAGACCAGCTATCATACCTGCATCT 18337 Query 86194 AGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGC 86246 ||| | ||| | || || |||||||| ||||| || |||||||| || || Sbjct 18336 TTAGTAGATTGACGTTGAGCATCATTAAAGTATGCAGGAACAGTAATTACAGC 18284 >seq72 Length=84283 Score = 172 bits (190), Expect = 4e-37 Identities = 157/194 (81%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 637113 AAAGAAAA-TTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGAC 637171 |||||||| |||||||||||| |||||| |||||||| ||||||||||||||| |||| | Sbjct 6937 AAAGAAAAATTATTGTCGATTTTTCTTCACCAAATATAGCTAAAGAAATGCATGTTGGTC 6996 Query 637172 ATTTAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-ATGTGTGGACAC 637230 | | ||||| ||||| || ||||| | ||| ||| | | | ||| || || || Sbjct 6997 ACCTTAGATCTACTATCATAGGTGATTGTATATGTCGATTGTATGAATATTTG-GGTTGT 7055 Query 637231 GATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCT 637290 ||||||| ||||||||||||||| || ||||||||||| ||||| |||||||| |||||| Sbjct 7056 GATGTTTCTCGTATTAATCATGTTGGAGATTGGGGAACACAATTTGGTATGTTGATTGCT 7115 Query 637291 TATATTAAAAATAA 637304 |||||| | |||| Sbjct 7116 TATATTGAGCATAA 7129 >seq1435 Length=77956 Score = 136 bits (150), Expect = 3e-26 Identities = 261/377 (69%), Gaps = 26/377 (7%) Strand=Plus/Plus Query 400304 TAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTG 400363 |||| || ||||| |||||||| |||||| | | ||||| | || || | |||||||| Sbjct 27382 TAATATTAACAGAAGGAGATTCCGCTAAATCGCTTGCTATCGCAGGTCTAAGTGTTATTG 27441 Query 400364 GAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTA 400423 | | |||| ||||||||| || || | |||| ||| | | |||||||| |||||| Sbjct 27442 GTCGCGATTTTTATGGAGTCTTTCCTTTACGAGGTAAATTACTCAATGTTAGAAATGCTA 27501 Query 400424 GTC-CTaaa--aaaaTTGCCGATAATGAGGAAATTACAGCAATCaaa--aaaaTTGTTGG 400478 | || || | ||| | |||| |||||| || ||| || |||||| |||| Sbjct 27502 CTTACTCAACTATAATAA---AAAATGCTGAAATTTCA--AATTTAATTAAAATTCTTGG 27556 Query 400479 ACT------TGAA--CAAG---GAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGT 400527 ||| | || |||| ||||| | || |||| | || ||||||| ||||| Sbjct 27557 ACTCAATTTTAAATGCAAGTATGAAAATTCTA--ATGAAATGAATAGTTTACGTTATGGA 27614 Query 400528 AGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATG 400587 | | |||||| | ||||||||||||| |||||| | || || ||||| ||||| || Sbjct 27615 AAAGTAATGATTATGGCTGATCAAGATGATGATGGCTCTCACATAAAAGGCTTAATAATC 27674 Query 400588 AATTTTATCCATTGTTTTTGGCCATCTCTTGTTAAATACGAAGGGTTTATTCAATCATTT 400647 |||||||| || | | ||||||| || || || | || |||||||||||||| Sbjct 27675 AATTTTATACACTCATATTGGCCAAAACTAGTCCAA---AATGGATTTATTCAATCATTC 27731 Query 400648 GCAACTCCACTATTAAA 400664 ||||| || |||| Sbjct 27732 ATTACTCCTTTAATAAA 27748 >seq1434 Length=77931 Score = 136 bits (150), Expect = 3e-26 Identities = 261/377 (69%), Gaps = 26/377 (7%) Strand=Plus/Plus Query 400304 TAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTG 400363 |||| || ||||| |||||||| |||||| | | ||||| | || || | |||||||| Sbjct 27382 TAATATTAACAGAAGGAGATTCCGCTAAATCGCTTGCTATCGCAGGTCTAAGTGTTATTG 27441 Query 400364 GAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTA 400423 | | |||| ||||||||| || || | |||| ||| | | |||||||| |||||| Sbjct 27442 GTCGCGATTTTTATGGAGTCTTTCCTTTACGAGGTAAATTACTCAATGTTAGAAATGCTA 27501 Query 400424 GTC-CTaaa--aaaaTTGCCGATAATGAGGAAATTACAGCAATCaaa--aaaaTTGTTGG 400478 | || || | ||| | |||| |||||| || ||| || |||||| |||| Sbjct 27502 CTTACTCAACTATAATAA---AAAATGCTGAAATTTCA--AATTTAATTAAAATTCTTGG 27556 Query 400479 ACT------TGAA--CAAG---GAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGT 400527 ||| | || |||| ||||| | || |||| | || ||||||| ||||| Sbjct 27557 ACTCAATTTTAAATGCAAGTATGAAAATTCTA--ATGAAATGAATAGTTTACGTTATGGA 27614 Query 400528 AGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATG 400587 | | |||||| | ||||||||||||| |||||| | || || ||||| ||||| || Sbjct 27615 AAAGTAATGATTATGGCTGATCAAGATGATGATGGCTCTCACATAAAAGGCTTAATAATC 27674 Query 400588 AATTTTATCCATTGTTTTTGGCCATCTCTTGTTAAATACGAAGGGTTTATTCAATCATTT 400647 |||||||| || | | ||||||| || || || | || |||||||||||||| Sbjct 27675 AATTTTATACACTCATATTGGCCAAAACTAGTCCAA---AATGGATTTATTCAATCATTC 27731 Query 400648 GCAACTCCACTATTAAA 400664 ||||| || |||| Sbjct 27732 ATTACTCCTTTAATAAA 27748 >seq1620 Length=46792 Score = 132 bits (146), Expect = 4e-25 Identities = 182/252 (72%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 69015 TAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACATT 69074 |||| ||||| ||||| ||| ||||||||| || ||| ||| ||| | ||||| Sbjct 24888 TAAAAGGTGTAGCATCACCAATTTCTCCTTTAAGAGCTGATACTTTGCCTTGAAGACATT 24947 Query 69075 CAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATCGG 69134 ||||||| || ||||| |||||||| | || ||| || |||||||||||||||||||| Sbjct 24948 CAATAAGATGACCAATGGTCATACGACTTGGAATAGCATGAGGATTGATAATAATATCGG 25007 Query 69135 GAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCT-TTGTATCCAATGGTA 69193 ||| || |||| | | || ||||||| || || || | || || ||| ||| Sbjct 25008 GAACTATTCCATCAGCAGTAAACGGCATATCTTCTTGACGATATGTTATA-CCACATGTA 25066 Query 69194 CCTTTTTGACCTGCTCTTGACGAAAATTTATCACCTACATTGGGAATTCTCTCTGATCGA 69253 ||||||||||| ||| | |||||||||||| | | |||||||| |||| ||| Sbjct 25067 CCTTTTTGACCATGTCTACTTGCAAATTTATCACCAATTTGAGGAATTCTAACTGAACGA 25126 Query 69254 ATTCTCATTTTA 69265 | | | | |||| Sbjct 25127 ACTTTAACTTTA 25138 >seq723 Length=46792 Score = 132 bits (146), Expect = 4e-25 Identities = 182/252 (72%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 69015 TAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACATT 69074 |||| ||||| ||||| ||| ||||||||| || ||| ||| ||| | ||||| Sbjct 21905 TAAAAGGTGTAGCATCACCAATTTCTCCTTTAAGAGCTGATACTTTGCCTTGAAGACATT 21846 Query 69075 CAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATCGG 69134 ||||||| || ||||| |||||||| | || ||| || |||||||||||||||||||| Sbjct 21845 CAATAAGATGACCAATGGTCATACGACTTGGAATAGCATGAGGATTGATAATAATATCGG 21786 Query 69135 GAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCT-TTGTATCCAATGGTA 69193 ||| || |||| | | || ||||||| || || || | || || ||| ||| Sbjct 21785 GAACTATTCCATCAGCAGTAAACGGCATATCTTCTTGACGATATGTTATA-CCACATGTA 21727 Query 69194 CCTTTTTGACCTGCTCTTGACGAAAATTTATCACCTACATTGGGAATTCTCTCTGATCGA 69253 ||||||||||| ||| | |||||||||||| | | |||||||| |||| ||| Sbjct 21726 CCTTTTTGACCATGTCTACTTGCAAATTTATCACCAATTTGAGGAATTCTAACTGAACGA 21667 Query 69254 ATTCTCATTTTA 69265 | | | | |||| Sbjct 21666 ACTTTAACTTTA 21655 >seq1424 Length=17339 Score = 127 bits (140), Expect = 2e-23 Identities = 245/356 (69%), Gaps = 13/356 (4%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| |||||||| ||||| | | ||| | ||| |||||| | |||| |||| || Sbjct 5733 ATCGAAATCTTCTCCTCCAAGATGAGTGTCTCCATTTGTAGCTTTAACTTCAAAAACACC 5674 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 | | | ||||| | | |||| ||||||||||| | ||| | ||| Sbjct 5673 TTGTGACATTTCCAAAATGGATATATCAAATGTTCCACCACCTAAGTCATA------TAC 5620 Query 282313 ATTCATTTCTTTGTCTTGGTTT---TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369 | || | || | ||| ||| |||| || || || |||| |||||||| ||||| Sbjct 5619 AGCAATAACCTTATTTTGATTTGCTTTATTAATCCCGTAAGCAAGTGCAGCAGCTGTTGG 5560 Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 |||||| |||||||| |||||| | ||||| || ||||||| ||||| | | Sbjct 5559 TTCATTTATAATTCTAGCAACATTTAATCCAGCTATCTGACCTGCATTCTTAGTTGATGC 5500 Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC-TTCTTTTC 282488 ||||| | || ||||||||||| || || |||||||| |||| | || ||| || | Sbjct 5499 CCTTTGAGCTTCATTAAAATATGCCGGTACTGTAATAACAGCATTCTTGACATTCATTCC 5440 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCAT-TGATGAAATTTG 282543 ||| |||||| ||| ||| ||||||||||||||| | ||| || || |||||| Sbjct 5439 CAA-ATAAGCTTCTGCAGTTGTTTTCATTTTACTTAATA-CATATGCTGCAATTTG 5386 >seq1423 Length=17339 Score = 127 bits (140), Expect = 2e-23 Identities = 245/356 (69%), Gaps = 13/356 (4%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| |||||||| ||||| | | ||| | ||| |||||| | |||| |||| || Sbjct 5733 ATCGAAATCTTCTCCTCCAAGATGAGTGTCTCCATTTGTAGCTTTAACTTCAAAAACACC 5674 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 | | | ||||| | | |||| ||||||||||| | ||| | ||| Sbjct 5673 TTGTGACATTTCCAAAATGGATATATCAAATGTTCCACCACCTAAGTCATA------TAC 5620 Query 282313 ATTCATTTCTTTGTCTTGGTTT---TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369 | || | || | ||| ||| |||| || || || |||| |||||||| ||||| Sbjct 5619 AGCAATAACCTTATTTTGATTTGCTTTATTAATCCCGTAAGCAAGTGCAGCAGCTGTTGG 5560 Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 |||||| |||||||| |||||| | ||||| || ||||||| ||||| | | Sbjct 5559 TTCATTTATAATTCTAGCAACATTTAATCCAGCTATCTGACCTGCATTCTTAGTTGATGC 5500 Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC-TTCTTTTC 282488 ||||| | || ||||||||||| || || |||||||| |||| | || ||| || | Sbjct 5499 CCTTTGAGCTTCATTAAAATATGCCGGTACTGTAATAACAGCATTCTTGACATTCATTCC 5440 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCAT-TGATGAAATTTG 282543 ||| |||||| ||| ||| ||||||||||||||| | ||| || || |||||| Sbjct 5439 CAA-ATAAGCTTCTGCAGTTGTTTTCATTTTACTTAATA-CATATGCTGCAATTTG 5386 >seq95 Length=63608 Score = 109 bits (120), Expect = 4e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 607624 GTGGTACTGATGAATATGGAACTACAACAATGATTAGAGCTCGTAAGGAAGGTGTAACTT 607683 ||||||||||||||||||| ||| | || |||| |||| || ||||| |||| | Sbjct 35076 GTGGTACTGATGAATATGGTACTGCTACTGAAATTAAAGCTGCTAGTGAAGGAATAACAT 35135 Query 607684 GTCGTGAACTTTGTGATAAGTATTTTGAGTTACACAAAAAAGTTTATGATTGGTTTAATA 607743 ||| ||| | |||||||| || |||| |||| || | |||||||||||||||||| Sbjct 35136 GTCAAGAATTATGTGATAAATACCATGAGATACATAAGTCAATTTATGATTGGTTTAATA 35195 Query 607744 TTGAATTTGATGTTTTTGGT 607763 |||| |||||| ||||||| Sbjct 35196 TTGATTTTGATCATTTTGGT 35215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740550030217962