Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1466 93.3 4e-14 seq1258 93.3 4e-14 seq1155 93.3 4e-14 >seq1466 Length=125466 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262 || ||||||| ||| ||||| ||||| | || ||||| | ||| || ||||| Sbjct 71659 ACCAAATGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCA 71600 Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322 ||||| || ||||| | ||||| | || ||||| || || || ||||||||||| | Sbjct 71599 AGTTGCTTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCTTGA 71540 Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382 ||||| ||| | | ||| | || || | || || ||||||| ||| | || || Sbjct 71539 ATTTTACTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTTT 71480 Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || |||||||||| || || ||||| Sbjct 71479 CCAGTTAATGTTTTTATAAAAATCTGCAT 71451 >seq1258 Length=100613 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262 || ||||||| ||| ||||| ||||| | || ||||| | ||| || ||||| Sbjct 40418 ACCAAATGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCA 40359 Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322 ||||| || ||||| | ||||| | || ||||| || || || ||||||||||| | Sbjct 40358 AGTTGCTTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCTTGA 40299 Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382 ||||| ||| | | ||| | || || | || || ||||||| ||| | || || Sbjct 40298 ATTTTACTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTTT 40239 Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || |||||||||| || || ||||| Sbjct 40238 CCAGTTAATGTTTTTATAAAAATCTGCAT 40210 >seq1155 Length=100669 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262 || ||||||| ||| ||||| ||||| | || ||||| | ||| || ||||| Sbjct 60252 ACCAAATGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCA 60311 Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322 ||||| || ||||| | ||||| | || ||||| || || || ||||||||||| | Sbjct 60312 AGTTGCTTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCTTGA 60371 Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382 ||||| ||| | | ||| | || || | || || ||||||| ||| | || || Sbjct 60372 ATTTTACTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTTT 60431 Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || |||||||||| || || ||||| Sbjct 60432 CCAGTTAATGTTTTTATAAAAATCTGCAT 60460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488534003168400