Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq630 93.3 3e-14 seq1466 87.8 1e-12 seq1258 87.8 1e-12 seq1155 87.8 1e-12 seq1253 84.2 1e-11 >seq630 Length=36350 Score = 93.3 bits (102), Expect = 3e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 33526 CCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGT 33585 ||||| || || | || | ||| || ||| || ||||| | ||||| || || || Sbjct 1 CCTCTTAATCGAAGAACAAGATGGAGGGTGGATTCCTTTTGAACATTGTAGTCCGAAAGG 60 Query 33586 GTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACA 33645 || | | | || |||||||||||||| ||||||||||| | || |||||| | || | | Sbjct 61 GTTCTTCCATCTTCCAATTGTTTTCCAGCAAAAATCAATCTTTGTTGATCTGGAGGTATA 120 Query 33646 CCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTC 33704 ||||| ||||| || || | || |||| || | ||||| | ||||| || Sbjct 121 CCTTCCTTGTCTTGGATCTT-AGATTTTACATTTTCAATAGTGTCAGAAGGATCCACTTC 179 Query 33705 AACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || ||||| || |||| ||||| | ||| |||||||| Sbjct 180 AAGTGTAATAGTTTTTCCAGTTAGTGTTTTAATAAAAATCTGCAT 224 >seq1466 Length=125466 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| || || || ||||| | || ||||| || ||||| | | || || Sbjct 71659 ACCAAATGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCA 71600 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| ||||| || || |||| | ||| |||||| | || | |||||||||||| | Sbjct 71599 AGTTGCTTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCTTGA 71540 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| ||| |||| || | || || || || || |||| || || ||||| Sbjct 71539 ATTTT-ACTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTT 71481 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||||| ||||||| ||| |||||||| Sbjct 71480 TCCAGTTAATGTTTTTATAAAAATCTGCAT 71451 >seq1258 Length=100613 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| || || || ||||| | || ||||| || ||||| | | || || Sbjct 40418 ACCAAATGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCA 40359 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| ||||| || || |||| | ||| |||||| | || | |||||||||||| | Sbjct 40358 AGTTGCTTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCTTGA 40299 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| ||| |||| || | || || || || || |||| || || ||||| Sbjct 40298 ATTTT-ACTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTT 40240 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||||| ||||||| ||| |||||||| Sbjct 40239 TCCAGTTAATGTTTTTATAAAAATCTGCAT 40210 >seq1155 Length=100669 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| || || || ||||| | || ||||| || ||||| | | || || Sbjct 60252 ACCAAATGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCA 60311 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| ||||| || || |||| | ||| |||||| | || | |||||||||||| | Sbjct 60312 AGTTGCTTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCTTGA 60371 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| ||| |||| || | || || || || || |||| || || ||||| Sbjct 60372 ATTTT-ACTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTT 60430 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||||| ||||||| ||| |||||||| Sbjct 60431 TCCAGTTAATGTTTTTATAAAAATCTGCAT 60460 >seq1253 Length=11614 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| || || | || | ||| || ||| || ||||| | ||||| || || Sbjct 11412 CCACCTCTTAATCGAAGAACAAGATGGAGGGTGGATTCCTTTTGAACATTGTAGTCCGAA 11471 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || |||||||||||||| ||||||||||| | || |||||| | || Sbjct 11472 AGGGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAAATCAATCTTTGTTGATCTGGAGGT 11531 Query 33643 ACACCTTCTTTGTC 33656 | |||||| ||||| Sbjct 11532 ATACCTTCCTTGTC 11545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328697442047040