Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq630 98.7 2e-15 seq1253 87.8 4e-12 >seq630 Length=36350 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || |||||||| || || | |||||||| ||||||| Sbjct 221 CAGATTTTTATTAAAACACTAACTGGAAAAACTATTACACTTGAAGTGGATCCTTCTGAC 162 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| ||||| ||||| ||||| || ||||| || || || ||| Sbjct 161 ACTATTGAAAATGTAAAATCTAAGATCCAAGACAAGGAAGGTATACCTCCAGATCAACAA 102 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || ||||| || |||||||||||||| || | | || ||||| || Sbjct 101 AGATTGATTTTTGCTGGAAAACAATTGGAAGATGGAAGAACCCTTTCGGACTACAATGTT 42 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 || || || || || || || |||||| Sbjct 41 CAAAAGGAATCCACCCTCCATCTTGTT 15 >seq1253 Length=11614 Score = 87.8 bits (96), Expect = 4e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || |||||||| || || | |||||||| ||||||||| | ||| ||||| Sbjct 11614 ACTGGAAAAACTATTACACTTGAAGTGGATCCTTCTGACACTATTGAAAACGTAAAATCT 11555 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || || |||||| | || || || ||||| Sbjct 11554 AAGATCCAAGACAAGGAAGGTATACCTCCAGATCAACAAAGATTGATTTTTGCTGGAAAA 11495 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||||||||| || | | || ||||| || || || || || || || || Sbjct 11494 CAATTGGAAGATGGAAGAACCCTTTCGGACTACAATGTTCAAAAGGAATCCACCCTCCAT 11435 Query 206374 CTTGTT 206379 |||||| Sbjct 11434 CTTGTT 11429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181796012416677