Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq62 82.4 8e-11 >seq62 Length=56742 Score = 82.4 bits (90), Expect = 8e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 78193 CGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGAC 78252 || ||||||||||| || || |||||||| ||||||||||| || | ||||| ||| | | Sbjct 52136 CGTAAATAGTACATTCCAGTTTTGAGACCTTTCTTCCATCCATAAAAGTGCAAACTTGTC 52077 Query 78253 AGCTTGGCCAGACTCGGGTTCT-CCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTA 78311 || | ||| | | || ||| |||| || || ||||| ||||| || || || | Sbjct 52076 AG-ACGACCAAAGTTTGGCTCTGCCATAAATATATTGAGAGACTGACTTTGATCAATAAA 52018 Query 78312 CGCACCGCGGTCGGCCGCCATGTC 78335 ||||| || || || |||||||| Sbjct 52017 GGCACCTCGATCAGCTGCCATGTC 51994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548513575811280