Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1466 102 5e-17 seq1258 102 5e-17 seq1155 102 5e-17 seq630 98.7 6e-16 >seq1466 Length=125466 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || || |||||||||| ||||||||||||||||||| | |||||| Sbjct 71659 ACCAAATGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCA 71600 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || || ||||| | | |||||| || || || | || || |||||| || Sbjct 71599 AGTTGCTTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCT-TG 71541 Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||| |||| || | || || || || ||||| | || || ||||| Sbjct 71540 AATTTTACTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTT 71481 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| | |||||||||||| Sbjct 71480 TCCAGTTAATGTTTTTATAAAAATCTGCAT 71451 >seq1258 Length=100613 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || || |||||||||| ||||||||||||||||||| | |||||| Sbjct 40418 ACCAAATGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCA 40359 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || || ||||| | | |||||| || || || | || || |||||| || Sbjct 40358 AGTTGCTTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCT-TG 40300 Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||| |||| || | || || || || ||||| | || || ||||| Sbjct 40299 AATTTTACTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTT 40240 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| | |||||||||||| Sbjct 40239 TCCAGTTAATGTTTTTATAAAAATCTGCAT 40210 >seq1155 Length=100669 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || || |||||||||| ||||||||||||||||||| | |||||| Sbjct 60252 ACCAAATGAAGTGTTGATTCCTTTTGAACATTATAATCTGAAAGTGTTCTACCATCTTCA 60311 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || || ||||| | | |||||| || || || | || || |||||| || Sbjct 60312 AGTTGCTTTCCAGCGAATATCAGTCTCTGTTGATCTGGTGGAATACCTTCTTTGTCT-TG 60370 Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||| |||| || | || || || || ||||| | || || ||||| Sbjct 60371 AATTTTACTTTTGACATTTTCTATAGTATCAGATGGGTCAACTTCAAGAGTAATAGTTTT 60430 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| | |||||||||||| Sbjct 60431 TCCAGTTAATGTTTTTATAAAAATCTGCAT 60460 >seq630 Length=36350 Score = 98.7 bits (108), Expect = 6e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 |||||| ||| |||||||||| || || || ||||| |||| | ||||| | ||| Sbjct 21 ATGGAGGGTGGATTCCTTTTGAACATTGTAGTCCGAAAGGGTTCTTCCATCTTCCAATTG 80 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 ||| || ||||| || || | ||||| || || || | || ||||||||| |||||| Sbjct 81 TTTTCCAGCAAAAATCAATCTTTGTTGATCTGGAGGTATACCTTCCTTGTCTTGGATCTT 140 Query 34623 TTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 ||||| | ||| ||||| |||||||| | || || ||||| || || Sbjct 141 AGATTTTACATTTTCAATAGTGTCAGAAGGATCCACTTCAAGTGTAATAGTTTTTCCAGT 200 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || ||||| | |||||||||||| Sbjct 201 TAGTGTTTTAATAAAAATCTGCAT 224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314723320849421