Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1466 143 2e-29 seq1258 143 2e-29 seq1155 143 2e-29 seq630 136 3e-27 seq1253 120 3e-22 >seq1466 Length=125466 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||| ||||||| | || || || |||||||||||||||| || || || Sbjct 71451 ATGCAGATTTTTATAAAAACATTAACTGGAAAAACTATTACTCTTGAAGTTGACCCATCT 71510 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | |||||| |||||||||||||||||||| || ||||| |||||| Sbjct 71511 GATACTATAGAAAATGTCAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 71570 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | |||| ||| || || ||| | ||||| || || |||| ||||| || Sbjct 71571 CAGAGACTGATATTCGCTGGAAAGCAACTTGAAGATGGTAGAACACTTTCAGATTATAAT 71630 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||||||||| || || | |||||||| Sbjct 71631 GTTCAAAAGGAATCAACACTTCATTTGGT 71659 >seq1258 Length=100613 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||| ||||||| | || || || |||||||||||||||| || || || Sbjct 40210 ATGCAGATTTTTATAAAAACATTAACTGGAAAAACTATTACTCTTGAAGTTGACCCATCT 40269 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | |||||| |||||||||||||||||||| || ||||| |||||| Sbjct 40270 GATACTATAGAAAATGTCAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 40329 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | |||| ||| || || ||| | ||||| || || |||| ||||| || Sbjct 40330 CAGAGACTGATATTCGCTGGAAAGCAACTTGAAGATGGTAGAACACTTTCAGATTATAAT 40389 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||||||||| || || | |||||||| Sbjct 40390 GTTCAAAAGGAATCAACACTTCATTTGGT 40418 >seq1155 Length=100669 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||| ||||||| | || || || |||||||||||||||| || || || Sbjct 60460 ATGCAGATTTTTATAAAAACATTAACTGGAAAAACTATTACTCTTGAAGTTGACCCATCT 60401 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | |||||| |||||||||||||||||||| || ||||| |||||| Sbjct 60400 GATACTATAGAAAATGTCAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 60341 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | |||| ||| || || ||| | ||||| || || |||| ||||| || Sbjct 60340 CAGAGACTGATATTCGCTGGAAAGCAACTTGAAGATGGTAGAACACTTTCAGATTATAAT 60281 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||||||||| || || | |||||||| Sbjct 60280 GTTCAAAAGGAATCAACACTTCATTTGGT 60252 >seq630 Length=36350 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||| | ||||| || || || || ||||||| ||||||||||| || || Sbjct 224 ATGCAGATTTTTATTAAAACACTAACTGGAAAAACTATTACACTTGAAGTGGATCCTTCT 165 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || |||||||| ||||| ||||| || |||||| Sbjct 164 GACACTATTGAAAATGTAAAATCTAAGATCCAAGACAAGGAAGGTATACCTCCAGATCAA 105 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| | ||| |||| || ||||| Sbjct 104 CAAAGATTGATTTTTGCTGGAAAACAATTGGAAGATGGAAGAACCCTTTCGGACTACAAT 45 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTT 27205 |||||||||| || ||| | ||| | ||| | || || Sbjct 44 GTTCAAAAGGAATCCACCCTCCATCTTGTTCTTCGATT 7 >seq1253 Length=11614 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27022 CTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAG 27081 ||||||| ||||||||||| || || ||| | ||||| | || ||| || || |||| Sbjct 11604 CTATTACACTTGAAGTGGATCCTTCTGACACTATTGAAAACGTAAAATCTAAGATCCAAG 11545 Query 27082 ACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAG 27141 |||| ||||| ||||| || |||||||| | || || | || || ||||||||||||| Sbjct 11544 ACAAGGAAGGTATACCTCCAGATCAACAAAGATTGATTTTTGCTGGAAAACAATTGGAAG 11485 Query 27142 ACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGC 27201 | | ||| |||| || ||||| |||||||||| || ||| | ||| | ||| | | Sbjct 11484 ATGGAAGAACCCTTTCGGACTACAATGTTCAAAAGGAATCCACCCTCCATCTTGTTCTTC 11425 Query 27202 GTTTGCGGGGTGGC 27215 | || | |||||| Sbjct 11424 GATTAAGAGGTGGC 11411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434909500482240