Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq630 138 2e-27 seq1253 129 1e-24 >seq630 Length=36350 Score = 138 bits (152), Expect = 2e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || ||||| | ||| ||| ||||| | |||||||| | ||| || | ||| Sbjct 10 CGAAGAACAAGATGGAGGGTGGATTCCTTTTGAACATTGTAGTCCGAAAGGGTTCTTCCA 69 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 || || | |||||| || ||||| ||||| | |||||| || || ||||| |||||| Sbjct 70 TCTTCCAATTGTTTTCCAGCAAAAATCAATCTTTGTTGATCTGGAGGTATACCTTCCTTG 129 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 ||||||||||| | |||||| | || |||||||| |||| || ||||| || || || Sbjct 130 TCTTGGATCTTAGATTTTACATTTTCAATAGTGTCAGAAGGATCCACTTCAAGTGTAATA 189 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || || || | || |||| || ||||||||| Sbjct 190 GTTTTTCCAGTTAGTGTTTTAATAAAAATCTGCATT 225 >seq1253 Length=11614 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || ||||| | ||| ||| ||||| | |||||||| | ||| || | ||| Sbjct 11424 CGAAGAACAAGATGGAGGGTGGATTCCTTTTGAACATTGTAGTCCGAAAGGGTTCTTCCA 11483 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 || || | |||||| || ||||| ||||| | |||||| || || ||||| |||||| Sbjct 11484 TCTTCCAATTGTTTTCCAGCAAAAATCAATCTTTGTTGATCTGGAGGTATACCTTCCTTG 11543 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 ||||||||||| | ||||||| | || |||||||| |||| || ||||| || || || Sbjct 11544 TCTTGGATCTTAGATTTTACGTTTTCAATAGTGTCAGAAGGATCCACTTCAAGTGTAATA 11603 Query 283065 GTCTTACCCGT 283075 || || || || Sbjct 11604 GTTTTTCCAGT 11614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046717245626598