Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1531 190 2e-43 seq1530 190 2e-43 >seq1531 Length=18023 Score = 190 bits (210), Expect = 2e-43 Identities = 158/193 (82%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 23773 TCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCA 23832 ||| | |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 8606 TCTTTAATATATGTTTCAATTAATAAGCTATACATTTCAGAATGAATATTTTCAATAGCA 8665 Query 23833 ATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTA 23892 || ||||| |||||||| ||||||| |||| | |||| || ||||| ||| | || | Sbjct 8666 ATTTGAAATCCATAAAAGAATCTAGCCTCAGGCCATTGTACTTCATTTGCAAAACATTCA 8725 Query 23893 GCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATA 23952 | | ||||| ||||||||||||||||||||||||||||| || | | || |||| Sbjct 8726 ACCAGGTTTTCATTAACAATACCATCACTAGCAGCAAAGAATGCCAATATATGGGATATA 8785 Query 23953 AAATGTCTTTCAT 23965 |||||||| |||| Sbjct 8786 AAATGTCTCTCAT 8798 Score = 93.3 bits (102), Expect = 4e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 23221 TGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCC 23280 |||||||||||||| ||| |||| ||||| || || ||||| |||| ||||||||| Sbjct 7891 TGATATTCCCCAACTCGTTTTTCAAAAAAGTTAGTTTTACCTTCTAGGCTGATATTTTCC 7950 Query 23281 ATAAAATCAAATGGATTAGAAGTATTATA 23309 |||||||| ||||||||||| |||| ||| Sbjct 7951 ATAAAATCGAATGGATTAGATGTATGATA 7979 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/217 (69%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| ||||||||||| ||||| | |||||| | || | || || || || || || || Sbjct 8065 ATCAGCTACAAATTCTATATACTTACACATATCAGCACAATTCATTCCAATAAGATTCAC 8124 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 || | || ||| || ||| ||||||||| ||| || || | || ||||| Sbjct 8125 AGGTAAAGCTTCACTGAAAAATTCTTTTTCAATATCAACTGCTTCAGTGATAATTTG--- 8181 Query 23463 AATAACTTCTTCACTAGGTGG---ATATTTTAAATACTTAAACAATAAACATGCAAAATC 23519 | ||| ||| | ||| ||||||| || ||||||| ||| || |||||||| Sbjct 8182 TTTGACTAAATCAAATGATGGTTTGTATTTTATGTAGTTAAACATTAAGCAAGCAAAATC 8241 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 | || || |||||||| ||||| || | ||||||| Sbjct 8242 AGTGTGAAGTCCTTCATCTCTACTGATAAGTTCATTA 8278 >seq1530 Length=18023 Score = 190 bits (210), Expect = 2e-43 Identities = 158/193 (82%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 23773 TCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCA 23832 ||| | |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 8606 TCTTTAATATATGTTTCAATTAATAAGCTATACATTTCAGAATGAATATTTTCAATAGCA 8665 Query 23833 ATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTA 23892 || ||||| |||||||| ||||||| |||| | |||| || ||||| ||| | || | Sbjct 8666 ATTTGAAATCCATAAAAGAATCTAGCCTCAGGCCATTGTACTTCATTTGCAAAACATTCA 8725 Query 23893 GCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATA 23952 | | ||||| ||||||||||||||||||||||||||||| || | | || |||| Sbjct 8726 ACCAGGTTTTCATTAACAATACCATCACTAGCAGCAAAGAATGCCAATATATGGGATATA 8785 Query 23953 AAATGTCTTTCAT 23965 |||||||| |||| Sbjct 8786 AAATGTCTCTCAT 8798 Score = 93.3 bits (102), Expect = 4e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 23221 TGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCC 23280 |||||||||||||| ||| |||| ||||| || || ||||| |||| ||||||||| Sbjct 7891 TGATATTCCCCAACTCGTTTTTCAAAAAAGTTAGTTTTACCTTCTAGGCTGATATTTTCC 7950 Query 23281 ATAAAATCAAATGGATTAGAAGTATTATA 23309 |||||||| ||||||||||| |||| ||| Sbjct 7951 ATAAAATCGAATGGATTAGATGTATGATA 7979 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/217 (69%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| ||||||||||| ||||| | |||||| | || | || || || || || || || Sbjct 8065 ATCAGCTACAAATTCTATATACTTACACATATCAGCACAATTCATTCCAATAAGATTCAC 8124 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 || | || ||| || ||| ||||||||| ||| || || | || ||||| Sbjct 8125 AGGTAAAGCTTCACTGAAAAATTCTTTTTCAATATCAACTGCTTCAGTGATAATTTG--- 8181 Query 23463 AATAACTTCTTCACTAGGTGG---ATATTTTAAATACTTAAACAATAAACATGCAAAATC 23519 | ||| ||| | ||| ||||||| || ||||||| ||| || |||||||| Sbjct 8182 TTTGACTAAATCAAATGATGGTTTGTATTTTATGTAGTTAAACATTAAGCAAGCAAAATC 8241 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 | || || |||||||| ||||| || | ||||||| Sbjct 8242 AGTGTGAAGTCCTTCATCTCTACTGATAAGTTCATTA 8278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521477329051800