Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1620 116 5e-21 seq723 116 5e-21 >seq1620 Length=46792 Score = 116 bits (128), Expect = 5e-21 Identities = 122/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 63741 TAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTG 63799 || ||| || |||| |||||||||||||| | ||| | |||||||||||| |||| Sbjct 25117 TAGAATTCCTCAAATTGGTGATAAATTTGCAAGTAG-ACATGGTCAAAAAGGTACATGTG 25059 Query 63800 GTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCG 63859 |||| | ||||| |||||||||||||| ||||| || || || || |||||| | Sbjct 25058 GTATAACATATCGTCAAGAAGATATGCCGTTTACTGCTGATGGAATAGTTCCCGATATTA 24999 Query 63860 TCATCAATCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 | |||||||| || ||| |||| |||||||||||| || Sbjct 24998 TTATCAATCCTCATGCTATTCCAAGTCGTATGACCATT 24961 >seq723 Length=46792 Score = 116 bits (128), Expect = 5e-21 Identities = 122/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 63741 TAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTG 63799 || ||| || |||| |||||||||||||| | ||| | |||||||||||| |||| Sbjct 21676 TAGAATTCCTCAAATTGGTGATAAATTTGCAAGTAG-ACATGGTCAAAAAGGTACATGTG 21734 Query 63800 GTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCG 63859 |||| | ||||| |||||||||||||| ||||| || || || || |||||| | Sbjct 21735 GTATAACATATCGTCAAGAAGATATGCCGTTTACTGCTGATGGAATAGTTCCCGATATTA 21794 Query 63860 TCATCAATCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 | |||||||| || ||| |||| |||||||||||| || Sbjct 21795 TTATCAATCCTCATGCTATTCCAAGTCGTATGACCATT 21832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667061549973720